YRC Public Data Repository - Protein Structure Prediction

Protein:	ade1
Organism:	Schizosaccharomyces pombe
Length:	788 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ade1.

Description	E-value	Query Range	Subject Range
gi\|62087150 - gi\|62087150\|dbj\|BAD92022.1\| phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide s...	656.0	[0..5]	[782..40]
gi\|114684353 - gi\|114684353\|ref\|XP_514869.2\| PREDICTED: phosphoribosylglycinamide formyltransferase, phosphoribosyl...	656.0	[0..5]	[782..4]
gi\|109065563 - gi\|109065563\|ref\|XP_001093303.1\| PREDICTED: phosphoribosylglycinamide formyltransferase, phosphoribo...	651.0	[0..5]	[782..4]
gi\|28839564 - gi\|28839564\|gb\|AAH47808.1\| Gart protein [Danio rerio]	636.0	[0..5]	[784..4]
PUR2_BOVIN - Trifunctional purine biosynthetic protein adenosine-3 OS=Bos taurus GN=GART PE=2 SV=1	634.0	[0..5]	[782..4]
gi\|68299602 - gi\|68299602\|gb\|AAT76522.2\| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synth...	634.0	[0..5]	[782..4]

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Predicted Domain #1

Region A:
Residues: [1-432]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPIIALLIG NGGREHTIAW KLCESPLISK VYVAPGNGGT ASNGAESKME NVNIGVCDFE  60
   61 QLVKFALDKD VNLVIPGPEL PLVEGIEGHF RRVGIPCFGP SALAARMEGS KVFSKDFMHR 120
  121 NNIPTAVYKS FSNYDHAKSF LDTCTFDVVI KADGLAAGKG VIIPKTKKEA FEALESIMLN 180
  181 EEFGSAGKNV VIEELLEGEE LSILTFSDGY TCRSLPPAQD HKRAFDGDKG PNTGGMGCYA 240
  241 PTPVASPKLL ETVQSTIIQP TIDGMRHEGY PLVGILFTGL MLTPSGPRVL EYNVRFGDPE 300
  301 TQAVLPLLES DLAEIILACV NHRLDAIDIV ISRKFSCAVV CVAGGYPGPY NKGDIITFDA 360
  361 LKDKNTRIFH AGTSIRDGNV VTNGGRVLAV EATGDSVEAA VRLAYEGVKT VHFDKMFYRK 420
  421 DIAHHALNPK RK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	93.522879
Match:	2qk4A
Description:	No description for 2qk4A was found.

Predicted Domain #2

Region A:
Residues: [433-788]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TREILTYENS GVSVDNGNEF VQRIKDLVKS TRRPGADADI GGFGGIFDLK QAGWNDPLLV  60
   61 SATDGVGSKL LIALSLNKHD TVGIDLVAMN VNDLVVQGAE PLIFLDYFAT GSLDLKVSTS 120
  121 FVEGVVKGCK QAGCALVGGE TSEMPGLYHD GHYDANGTSV GAVSRDDILP KPESFSKGDI 180
  181 LLGLASDGVH SNGYSLVRKI VEYSDLEYTS VCPWDKNVRL GDSLLIPTRI YVKPLLHVIR 240
  241 KNIVKGMAHI TGGGLVENVP RMLPSHLNAI IDVDTWEVPE VFKWLKDAGN VPISDMARTF 300
  301 NMGIGMVVAV ASEDAEETMK ELTSVGETVY RIGQLVDKES SSERCHLVNL NKWETF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	83.69897
Match:	1cliA
Description:	Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain; Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits