| Protein: | SPBC13A2.04c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 618 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC13A2.04c.
| Description | E-value | Query Range |
Subject Range |
|
|
254.0 | [0..1] | [610..1] |
|
|
211.0 | [0..17] | [586..3] |
|
|
210.0 | [0..18] | [586..4] |
|
|
210.0 | [0..22] | [608..2] |
|
|
209.0 | [0..12] | [616..53] |
|
|
207.0 | [0..36] | [614..1] |
|
|
203.0 | [0..25] | [604..557] |
|
Region A: Residues: [1-618] |
1 11 21 31 41 51
| | | | | |
1 MSSIEEQITK SDSDFIISED QSYLSKEKKA DGSATINTAD EQSSTDELQK SMSTGVLVNG 60
61 DLYPSPTEEE LATLPRVCGT IPWKAFIIII VELCERFAYY GLTVPFQNYM QFGPKDATPG 120
121 ALNLGESGAD GLSNFFTFWC YVTPVGAALI ADQFLGRYNT IVCSAVIYFI GILILTCTAI 180
181 PSVIDAGKSM GGFVVSLIII GLGTGGIKSN VSPLMAEQLP KIPPYVKTKK NGSKVIVDPV 240
241 VTTSRAYMIF YWSINVGSLS VLATTSLEST KGFVYAYLLP LCVFVIPLII LAVSKRFYKH 300
301 TPPSGSIFVR VGQVFFLAAQ NKFNLEKTKP SCTTTVGRVT LKDQWDDLFI DELKRALRAC 360
361 KTFLFYPIYW VCYGQMTNNL ISQAGQMQTG NVSNDLFQAF DSIALIIFIP ICDNIIYPLL 420
421 RKYNIPFKPI LRITLGFMFA TASMIYAAVL QAKIYQRGPC YANFTDTCVS NDISVWIQIP 480
481 AYVLIAFSEI FASITGLEFA FTKAPPSMKS IITALFLFTN AFGAILSICI SSTAVNPKLT 540
541 WMYTGIAVTA FIAGIMFWVC FHHYDAMEDE QNQLEFKRND ALTKKDVEKE VHDSYSMADE 600
601 SQYNLEKATA EEEIMKST
|
| Detection Method: |  |
| Confidence: | 13.30103 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| binding | 1.26757615356623 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
