| Protein: | pop2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 703 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pop2.
| Description | E-value | Query Range |
Subject Range |
|
|
532.0 | [0..119] | [702..1166] |
|
|
530.0 | [0..74] | [701..901] |
|
|
524.0 | [0..119] | [702..1038] |
|
|
494.0 | [0..108] | [703..593] |
|
Region A: Residues: [1-126] |
1 11 21 31 41 51
| | | | | |
1 MSLSRCPTDN SSSRINSSVP LINSSSPATP PESFDPQVFP SSLIHGDNLL PQDDQIASDP 60
61 RSESNSCNGN TSSSLPCTDS YQYPLKHSCT PSFLRKFNES IENVSYKCLD HSPPDSVPGD 120
121 FSISLV
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [127-219] |
1 11 21 31 41 51
| | | | | |
1 PQRNFLYSHS SLPPKIISID RNNRIKLDNS ISSNSDNFPP SPKVDTSNTV SPGSKPISED 60
61 LEDLNLQSIV QTFEDLPEGI QSYAFFQLLR SCN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [220-703] |
1 11 21 31 41 51
| | | | | |
1 RQSMRLLLNE CEPLLKKDIL SNLPFSIVQS ILLNLDIHSF LSCRLVSPTW NRILDVHTSY 60
61 WKHMFSLFGF QINENDWKYA NPNLNRPPFL HNDQISDDYF PEIFKRHFLN RKRWLFPSIP 120
121 PSHLSFPIHV PNFMITSLLL HKDRIITTSG SGTIQIHNAI TGVLEARLEG HKEGVWAVKI 180
181 HENTLVSGSI DKTVRVWNIE KAKCTHIFRG HISIIRCLEI LVPSRLIRHG VEIVEPDQPY 240
241 IVSGSRDHTL RVWKLPKNTD PPYLPDNTNS IDRWEKNPYF VHTLIGHTDS VRTISGYGDI 300
301 LVSGSYDSSI RIWRVSTGEC LYHLRGHSLR IYSVLYEPER NICISGSMDK SIRVWDLSTG 360
361 TCKYVLEGHD AFVTLLNVFQ NRLISGSADS TIRIWDLNTG KPLMVLPSNS GYISSFVSDE 420
421 HKIISGNDGS VKLWDVRTGK LLRFLLTDLT KIWHVDFDAM RCVAAVQRDD QAYLEVINFS 480
481 GSRP
|
| Detection Method: | |
| Confidence: | 75.30103 |
| Match: | 1nexB |
| Description: | Cdc4 F-box and linker domains; Cdc4 propeller domain |
Matching Structure (courtesy of the PDB): |
|
