| Protein: | pof3 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 577 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pof3.
| Description | E-value | Query Range |
Subject Range |
|
|
246.0 | [0..1] | [330..319] |
|
|
236.0 | [0..2] | [393..85] |
|
|
235.0 | [0..2] | [393..85] |
|
|
233.0 | [0..2] | [393..85] |
|
|
232.0 | [0..2] | [393..85] |
|
|
232.0 | [0..2] | [393..85] |
|
Region A: Residues: [1-308] |
1 11 21 31 41 51
| | | | | |
1 MNNYQVKAIK EKTQQYLSKR KFEDALTFIT KTIEQEPNPT IDLFELRAQV YEKSGQYSQA 60
61 ELDAKRMIHL NARNARGYLR LGKLLQLDGF DKKADQLYTQ GLRMVHKMDP LRPVLKKVSQ 120
121 RLNERILRTR PVLDLFRILP REVLLCILQQ LNFKSIVQCM QVCKHWRDCI KKEPSLFCCL 180
181 DFSCASPRSV NSRDRNVMAV ARYSVYSKDN IQEVIGLEKL GILTPTKALL RSVKSLKVYK 240
241 TISPLHTQST DKLYTIWTPF SELHYFYCAT PITFSIASKI LSCCKKLKQV ELVDLIPDLI 300
301 FDSMDWDK
|
| Detection Method: |  |
| Confidence: | 50.0 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 4.81092926633672 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 4.73323750175899 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 4.038463864925 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 3.25461549315207 | bayes_pls_golite062009 |
| binding | 2.09193012129784 | bayes_pls_golite062009 |
| ligase activity | 1.72049482453565 | bayes_pls_golite062009 |
| protein binding | 1.52807685989528 | bayes_pls_golite062009 |
| hydrolase activity | 0.619711232527193 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0195797944362903 | bayes_pls_golite062009 |
|
Region A: Residues: [309-380] |
1 11 21 31 41 51
| | | | | |
1 LFNAESVPLA LKSLTFIRNQ KFPFHHKEQQ FLKDLLSASP YLEYLEASYQ SDLVAAIKKY 60
61 KINLRSLIII DE
|
| Detection Method: | |
| Confidence: | 3.522879 |
| Match: | 2ifuA |
| Description: | No description for 2ifuA was found. |
|
Region A: Residues: [381-577] |
1 11 21 31 41 51
| | | | | |
1 GVSNTVKDLA FLPQSLTTLI VKPCNPASTI LCPYLFPTNV RMESLINLEL FLYLRLSQND 60
61 IDNVVKFLTS CYKLKKLVLH DSLALAPHFF EIFASLPELE HLEIPDNVAL QNKHAIHITD 120
121 CCPNLKYVNF SNSISLDGSG FIAVLRGLKE LKRIDIINCD SVSRDAIDWA RSKGMQVTVA 180
181 SSLPNSQPLG TKKIRLI
|
| Detection Method: | |
| Confidence: | 3.57 |
| Match: | 1fs2A |
| Description: | Skp2; Cyclin A/CDK2-associated p19, Skp2 |
Matching Structure (courtesy of the PDB): |
|
