YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC24C6.09c
Organism:	Schizosaccharomyces pombe
Length:	825 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC24C6.09c.

Description	E-value	Query Range	Subject Range
gi\|53764325, gi\|... - gi\|75906719\|ref\|YP_321015.1\| putative phosphoketolase [Anabaena variabilis ATCC 29413], gi\|75700444\|...	597.0	[0..41]	[820..2]
PHK_GLOVI - Probable phosphoketolase OS=Gloeobacter violaceus GN=glr0997 PE=3 SV=1 PHK_GLOVI - Probable phosphoketolase OS=Gloeobacter violaceus (strain PCC 7421) GN=glr0997 PE=3 SV=1	595.0	[0..51]	[820..12]
gi\|25353158 - pir\|\|AH2126 hypothetical protein all2567 [imported] - Nostoc sp. (strain PCC 7120) PHK2_NOSS1 - Probable phosphoketolase 2 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=all2567 PE=3 SV=1	595.0	[0..41]	[820..2]
gi\|23125793, gi\|... - gi\|23125793\|ref\|ZP_00107711.1\| COG3957: Phosphoketolase [Nostoc punctiforme PCC 73102], gi\|186682350...	593.0	[0..41]	[820..2]
gi\|86555167, gi\|... - gi\|86606625\|ref\|YP_475388.1\| putative phosphoketolase [Synechococcus sp. JA-3-3Ab], gi\|86555167\|gb\|A... gi\|86606625 - gi\|86606625\|ref\|YP_475388.1\| D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase family pr...	590.0	[0..49]	[820..10]
gi\|86557165, gi\|... - gi\|86608623\|ref\|YP_477385.1\| putative phosphoketolase [Synechococcus sp. JA-2-3B'a(2-13)], gi\|865571... gi\|86608623 - gi\|86608623\|ref\|YP_477385.1\| D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase family pr...	588.0	[0..49]	[820..10]
PHK_NITEU - Probable phosphoketolase OS=Nitrosomonas europaea GN=NE2135 PE=3 SV=1 PHK_NITEU - Probable phosphoketolase OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) GN=NE2135 PE=3 SV...	574.0	[0..48]	[818..5]
gi\|92109503, gi\|... - gi\|92109503\|ref\|YP_571790.1\| putative phosphoketolase [Nitrobacter hamburgensis X14], gi\|91802585\|gb...	573.0	[0..44]	[822..3]
gi\|45915893, gi\|... - gi\|69276943\|ref\|ZP_00612415.1\| Fructose-6-phosphate phosphoketolase [Mesorhizobium sp. BNC1], gi\|681...	570.0	[0..44]	[823..4]
gi\|21647520, gi\|... - gi\|21674344\|ref\|NP_662409.1\| putative phosphoketolase [Chlorobium tepidum TLS], gb\|AAM72751.1\| conse...	570.0	[0..23]	[820..27]

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Predicted Domain #1

Region A:
Residues: [1-825]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATQNDIPNS TPEDLAKQVE IAEKHPDPPA MPSRLPDSLK TLEAKIDTSK ITDEEVANVH  60
   61 RFQRACDYLA ASLIFLSNGL YTGGDLEEKD IKTRLLGHWG TCPGLSIVYS HCNRIINKYD 120
  121 LNMLFVVGPG HGAPAILSAL FLEDSLGPFY PRYQFTKEGL NNLINTFSLP GGFPSHVNAE 180
  181 VPGAIHEGGE LGYALSVSYG AVLDRPDLIV TCVVGDGEAE TGPTATSWHA HKFLDPAESG 240
  241 AVIPVLELNG YKISERTIYG CMDDSELLSL FSGFGYEVAI VNDTPDQNRV MAATMDWAVE 300
  301 RIHDIQHRAR VNREEIKPRW PMIILRTPKG KGCPKYLNGK FLEGTFRAHQ VPLKLARTDT 360
  361 NQRNLLKDWL NSYNCQDFLD EHGLPTKGIT EHLPPREKRM GQRHETYNSY LPLKVPDWKK 420
  421 YGVKKGETTS ATSVVGQYLD ELLVTNDSTL RIFSPDELES NKLDGALKHS YRTMQTDPEL 480
  481 MAKRGRVTEV LSEHLCQGFM QGYTLTGRTA IFPSYEAFMT IVVSMLVQYS KFLKMGLETG 540
  541 WHGKFGSLNY VTSSTWARQE HNGFSHQSPR FITTMLSLKP GVSRVYFPPD ANCFLATVAR 600
  601 CMKSENTINL MVSSKNPQPA YLSVEEAEHH CKAGASVWKF ASTDNGENPD VVIAGVGNEI 660
  661 MFEVVKAAEM LQNDIPELRV RVINVTDLMV LSSLHPHGMN PAEFDSLFTK DRHVHFNYHG 720
  721 YVMDLKALLF DRIQGTRVTM EGYREEGTTT TPFNMMMCNN TSRYHVARMA LQHALHNPTV 780
  781 AVNCNMLCAK YAWKLEEIEN YIMENKDDPP EIYAAPVFKN KTSTL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	118.0
Match:	2qtaA
Description:	No description for 2qtaA was found.

Predicted functions:

Term	Confidence	Notes
binding	0.694757358714979	bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	0.168651698745478	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: