YRC Public Data Repository - Protein Structure Prediction

Protein:	ptc2
Organism:	Schizosaccharomyces pombe
Length:	370 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ptc2.

Description	E-value	Query Range	Subject Range
gi\|33087518 - gi\|33087518\|gb\|AAP92916.1\| putative serine/threonine phosphatase 2C ptc2 [Hypocrea jecorina]	329.0	[0..1]	[362..1]
gi\|32406686, gi\|... - gi\|32406686\|ref\|XP_323956.1\| hypothetical protein [Neurospora crassa], gi\|28950040\|emb\|CAD70795.1\| p... gi\|85091318 - gi\|85091318\|ref\|XP_958843.1\| hypothetical protein NCU04600 [Neurospora crassa OR74A]	326.0	[0..1]	[348..1]
gi\|46137447, gi\|... - gi\|46137447\|ref\|XP_390415.1\| hypothetical protein FG10239.1 [Gibberella zeae PH-1], gi\|42547239\|gb\|E...	326.0	[0..1]	[359..1]
gi\|116179784, gi... - gi\|88184817\|gb\|EAQ92285.1\| hypothetical protein CHGG_00520 [Chaetomium globosum CBS 148.51], gi\|1161...	324.0	[0..1]	[344..1]
gi\|119184747, gi... - gi\|90302029\|gb\|EAS31660.1\| hypothetical protein CIMG_07139 [Coccidioides immitis RS], gi\|119184747\|r... gi\|240109968 - gi\|240109968\|gb\|EER28137.1\| protein phosphatase 2C, putative [Coccidioides posadasii C735 delta SOWg...	324.0	[0..1]	[353..1]
gi\|38109901, gi\|... - gi\|39951417\|ref\|XP_363425.1\| hypothetical protein MG01351.4 [Magnaporthe grisea 70-15], gb\|EAA55700....	322.0	[0..1]	[348..1]
gi\|115402127, gi... - gi\|115402127\|ref\|XP_001217140.1\| hypothetical protein ATEG_08554 [Aspergillus terreus NIH2624], gi\|1...	321.0	[0..1]	[330..1]
PP2C3_SCHPO - Protein phosphatase 2C homolog 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ptc3 PE=3... ptc3 - protein phosphatase 2C Ptc3	319.0	[0..1]	[366..1]
gi\|609658 - gi\|609658\|gb\|AAA67321.1\| protein phosphatase 2C (ptc3+) [Schizosaccharomyces pombe]	316.0	[0..1]	[366..1]
gi\|169768062 - gi\|169768062\|ref\|XP_001818502.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|83766357 - gi\|83766357\|dbj\|BAE56500.1\| unnamed protein product [Aspergillus oryzae]	313.0	[0..1]	[330..1]

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Predicted Domain #1

Region A:
Residues: [1-370]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQTLSEPVL DKHSSSGGDR WLHFGVSHMQ GWRISMEDAH CALLNFTDSN SSNPPTSFFG  60
   61 VFDGHGGDRV AKYCRQHLPD IIKSQPSFWK GNYDEALKSG FLAADNALMQ DRDMQEDPSG 120
  121 CTATTALIVD HQVIYCANAG DSRTVLGRKG TAEPLSFDHK PNNDVEKARI TAAGGFIDFG 180
  181 RVNGSLALSR AIGDFEYKKD SSLPPEKQIV TAFPDVVIHN IDPDDEFLIL ACDGIWDCKS 240
  241 SQQVVEFVRR GIVARQSLEV ICENLMDRCI ASNSESCGIG CDNMTICIVA FLHGRGLEDW 300
  301 YNWITQRVNS GEGPCAPPSY AELRGPNTIA DARNLQLEYD HIASHEYGSG DTYDSDSDDE 360
  361 TIAYDRYYLH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	73.221849
Match:	2i0oA
Description:	No description for 2i0oA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits