| Protein: | ned1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 656 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ned1.
| Description | E-value | Query Range |
Subject Range |
|
|
871.0 | [0..1] | [649..1] |
|
|
818.0 | [0..1] | [604..1] |
|
|
816.0 | [0..1] | [604..1] |
|
|
788.0 | [0..1] | [594..1] |
|
|
786.0 | [0..1] | [589..1] |
|
|
774.0 | [0..1] | [639..1] |
|
|
755.0 | [0..1] | [592..1] |
|
|
730.0 | [0..1] | [590..1] |
|
|
727.0 | [0..1] | [648..1] |
|
|
725.0 | [0..1] | [594..1] |
|
Region A: Residues: [1-100] |
1 11 21 31 41 51
| | | | | |
1 MQYVGRAFDS VTKTWNAINP STLSGAIDVI VVEQEDKTLA CSPFHVRFGK FSLLLPSDKK 60
61 VEFSVNGQLT GFNMKLGDGG EAFFVFATEN AVPRELQTSP
|
| Detection Method: |  |
| Confidence: | 68.408935 |
| Match: | PF04571.5 |
| Description: | No description for PF04571.5 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.882 | 0.019 | ascospore formation | b.101.1 | Ribonuclease domain of colicin E3 |
| View | Download | 0.810 | N/A | N/A | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.774 | N/A | N/A | b.101.1 | Ribonuclease domain of colicin E3 |
| View | Download | 0.768 | N/A | N/A | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.734 | N/A | N/A | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
|
Region A: Residues: [101-273] |
1 11 21 31 41 51
| | | | | |
1 IVSPTTSPKQ TPSINVTEPQ DLELDKVSQD HEKDQSNTYL MEDGYEFPLT RDLIRRSKSD 60
61 ADQTPPTGFK HLRHSSCLEM AGSDRTPSMP ATTLADLRLL QKAKELGKRL SGKELPTRVG 120
121 DNGDVMLDMT GYKSSAANIN IAELARETFK DEFPMIEKLL REDEEGNLWF HAS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.205 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [274-656] |
1 11 21 31 41 51
| | | | | |
1 EDAKKFAEVY GHSPPASPSR TPASPKSDSA LMDEDSDLSR RHSLSEQSLS PVSESYPQYA 60
61 KTLRLTSDQL RSLNLKPGKN ELSFGVNGGK AICTANLFFW KHNDPVVISD IDGTITKSDA 120
121 LGHMFTLIGK DWTHAGVAKL YTDITNNGYK IMYLTSRSVG QADSTRHYLR NIEQNGYSLP 180
181 DGPVILSPDR TMAALHREVI LRKPEVFKMA CLRDLCNIFA LPVPRTPFYA GFGNRITDAI 240
241 SYNHVRVPPT RIFTINSAGE VHIELLQRSG HRSSYVYMNE LVDHFFPPIE VSTRDEVSSF 300
301 TDVNFWRSPL LELSDEEEDD TNKSTSKSPK TPKNTKFGYQ EFEGIDEEDA QDYSPSPLIK 360
361 SFNELMFEGE EDEEGEEDVE NAV
|
| Detection Method: | |
| Confidence: | 1.24 |
| Match: | 2hlkA |
| Description: | No description for 2hlkA was found. |
