| Protein: | sod22 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 759 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sod22.
| Description | E-value | Query Range |
Subject Range |
|
|
343.0 | [0..1] | [745..1] |
|
|
329.0 | [0..1] | [754..1] |
|
|
327.0 | [0..1] | [745..1] |
|
|
321.0 | [0..1] | [754..1] |
|
|
319.0 | [0..1] | [693..1] |
|
|
318.0 | [0..1] | [711..1] |
|
|
315.0 | [0..6] | [724..74] |
|
|
314.0 | [0..6] | [730..73] |
|
Region A: Residues: [1-282] |
1 11 21 31 41 51
| | | | | |
1 MAWSQVEISK PHLAYAIIGG FTSLFMLCSL IIKEKLFLGE ATMATATGLI FGPYVAKLFV 60
61 PTSWGNTDYI TEELARVLLV VEVFAAGAEL PRAYMLRHWR SMFVMLLPVM IFGWLVSTGF 120
121 MYALIPRLSF LESLAIAACI TATDPVLASS IVGKGKFARR VPGHLRNMLL AESGCNDGMA 180
181 IPFLYLAIYL IIEKPARHAG RDWVCIIILY ECTFGCVLGA IIGVIARKMI KFSERRGLMD 240
241 RESFLVFYFV LALFCGGIGT IIGVDDLLVS FCAGAAFSWD SW
|
| Detection Method: |  |
| Confidence: | 58.0 |
| Match: | 1occA |
| Description: | Mitochondrial cytochrome c oxidase, subunit I |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [283-488] |
1 11 21 31 41 51
| | | | | |
1 FSKKTEESHV SNVIDLLLNL SFFVYVGAIM PWPQFHMPHM DLSVWRLVVL AICILIARRI 60
61 PAVLLFKSFV PDIINWREAL FAGHFGPIGV GALYTCLVAR AELEVHSTVP EPNDAIENPE 120
121 IPNWYCIQVM WPVVCFLVLS SIIVHGSSIA FFMLGKRINT LALSFTRTRD SHFAFNLPRV 180
181 RQGQSLPIKR VDALRSSANS IASSIR
|
| Detection Method: | |
| Confidence: | 1.06 |
| Match: | 1kqfC |
| Description: | Formate dehydrogenase N, cytochrome (gamma) subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrogen ion transmembrane transporter activity | 7.50940473108878 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 5.81094633113969 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 5.47229089392626 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 5.38267095422061 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 4.98308064247273 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 4.94646483547119 | bayes_pls_golite062009 |
| transporter activity | 3.25025513931324 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.15068691999889 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.13647909964298 | bayes_pls_golite062009 |
| binding | 0.979727257352345 | bayes_pls_golite062009 |
| protein binding | 0.291685656235254 | bayes_pls_golite062009 |
| ubiquinol-cytochrome-c reductase activity | 0.143276144501499 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor | 0.143276144501499 | bayes_pls_golite062009 |
|
Region A: Residues: [489-759] |
1 11 21 31 41 51
| | | | | |
1 RRHPVNIQED EDADISTVSL PEAAHLREER AESPRGGHYD AEEFPSEDYE SRQPRRSNEE 60
61 DREEEMNPGD ETYLIGEDLV VEDSQGNIIS HTSSRDANGP SIDEKLAQGD PKAKSFGRKF 120
121 RSFLRRSYDT FQRNLHEPDD ERQREPTLGH IESSIENHRP RYSRQNSESH LRENSVERRR 180
181 REQVLTNIGD SESEDDNIPR PGIVPFYNEN NESSSDTRNG LLSDNVSESR SRRPSRAPSA 240
241 AVSSEGSPVE EDNEAQHRPN IRFLELTRAW E
|
| Detection Method: | |
| Confidence: | 1.65 |
| Match: | 1dv4A |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
