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View Structure Prediction Details

Protein: his1
Organism: Schizosaccharomyces pombe
Length: 310 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for his1.

Description E-value Query
Range
Subject
Range
gi|168986284, gi... - gi|168986343|dbj|BAG11882.1| ATP phosphoribosyltransferase [Escherichia coli O55:H7], gi|168986284|d...
HIS1_ECOHS - ATP phosphoribosyltransferase OS=Escherichia coli O9:H4 (strain HS) GN=hisG PE=3 SV=1
gi|168986400 - gi|168986400|dbj|BAG11938.1| ATP phosphoribosyltransferase [Escherichia coli O55:H6]
HIS1_ECO24 - ATP phosphoribosyltransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=hisG PE=3 SV=1
HIS1_ECO27 - ATP phosphoribosyltransferase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=hisG PE=3 SV=1
HIS1_ECO8A - ATP phosphoribosyltransferase OS=Escherichia coli O8 (strain IAI1) GN=hisG PE=3 SV=1
gi|237704476, gi... - gi|237704476|ref|ZP_04534957.1| ATP phosphoribosyltransferase [Escherichia sp. 3_2_53FAA], gi|226900...
HIS1_ECO45 - ATP phosphoribosyltransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=hisG PE=3 SV=1
HIS1_ECO55 - ATP phosphoribosyltransferase OS=Escherichia coli (strain 55989 / EAEC) GN=hisG PE=3 SV=1
gi|194428767, gi... - gi|194428767|ref|ZP_03061303.1| ATP phosphoribosyltransferase [Escherichia coli B171], gi|194413214|...
gi|194431506, gi... - gi|194431506|ref|ZP_03063798.1| ATP phosphoribosyltransferase [Shigella dysenteriae 1012], gi|194420...
gi|194424870, gi... - gi|194436142|ref|ZP_03068244.1| ATP phosphoribosyltransferase [Escherichia coli 101-1], gi|194424870...
HIS1_ECOBW - ATP phosphoribosyltransferase OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=hisG PE=3 SV=1
HIS1_ECOSE - ATP phosphoribosyltransferase OS=Escherichia coli (strain SE11) GN=hisG PE=3 SV=1
HIS1_SHISS - ATP phosphoribosyltransferase OS=Shigella sonnei (strain Ss046) GN=hisG PE=3 SV=1
HIS1_ECOL6 - ATP phosphoribosyltransferase OS=Escherichia coli O6 GN=hisG PE=3 SV=1
HIS1_ECOLI - ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase) (ATP-PRT) - Escherichia coli
EG10449 - ATP phosphoribosyltransferase / ATP-phosphoribosyltransferase
HIS1_ECOLC - ATP phosphoribosyltransferase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=hisG PE=...
sp|B7UT56|HIS1_ECO27 - ATP phosphoribosyltransferase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=hisG PE=3 SV=1
HIS1_SHIB3 - ATP phosphoribosyltransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=hisG PE...
gi|190909654, gi... - gi|191170138|ref|ZP_03031692.1| ATP phosphoribosyltransferase [Escherichia coli F11], gi|190909654|g...
gi|193062818, gi... - gi|193062818|ref|ZP_03043911.1| ATP phosphoribosyltransferase [Escherichia coli E22], gi|192931461|g...
gi|192955107, gi... - gi|193071570|ref|ZP_03052478.1| ATP phosphoribosyltransferase [Escherichia coli E110019], gi|1929551...
gi|124530718, gi... - gi|124530718|ref|ZP_01701275.1| ATP phosphoribosyltransferase [Escherichia coli B], gi|124499036|gb|...
HIS1_ECOK1 - ATP phosphoribosyltransferase OS=Escherichia coli O1:K1 / APEC GN=hisG PE=3 SV=1
HIS1_ECODH - ATP phosphoribosyltransferase OS=Escherichia coli (strain K12 / DH10B) GN=hisG PE=3 SV=1
HIS1_ECOSM - ATP phosphoribosyltransferase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=hisG PE=3 SV=1
gi|1736697, gi|8... - gi|89108840|ref|AP_002620.1| ATP phosphoribosyltransferase [Escherichia coli str. K-12 substr. W3110...
HIS1_ECOL6 - ATP phosphoribosyltransferase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=hisG...
HIS1_ECOUT - ATP phosphoribosyltransferase OS=Escherichia coli (strain UTI89 / UPEC) GN=hisG PE=3 SV=1
EG10449 - ATP phosphoribosyltransferase / ATP-phosphoribosyltransferase
HIS1_ECOL5 - ATP phosphoribosyltransferase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=hisG PE=3 SV=1
371.0 [0..8] [309..4]
HIS1_SHIBS - ATP phosphoribosyltransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=hisG PE=3 SV=1
HIS1_ECO7I - ATP phosphoribosyltransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=hisG PE=3 SV=1
371.0 [0..7] [309..1]
HIS1_SHIDS - ATP phosphoribosyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=hisG PE=3 SV=1
371.0 [0..8] [309..4]
gi|56480021, gi|... - gi|56480021|ref|NP_707914.2| ATP phosphoribosyltransferase [Shigella flexneri 2a str. 301], gi|56383...
HIS1_SHIFL - ATP phosphoribosyltransferase OS=Shigella flexneri GN=hisG PE=3 SV=2
HIS1_SHIF8 - ATP phosphoribosyltransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=hisG PE=3 SV=1
gi|30063469, gi|... - gi|30063469|ref|NP_837640.1| ATP phosphoribosyltransferase [Shigella flexneri 2a str. 2457T], gi|300...
370.0 [0..8] [309..4]
HIS1_PASMU - ATP phosphoribosyltransferase OS=Pasteurella multocida (strain Pm70) GN=hisG PE=3 SV=1
HIS1_PASMU - ATP phosphoribosyltransferase OS=Pasteurella multocida GN=hisG PE=3 SV=1
369.0 [0..8] [309..4]
gi|168751655, gi... - gi|188014356|gb|EDU52478.1| ATP phosphoribosyltransferase [Escherichia coli O157:H7 str. EC4113], gi...
gi|254793801, gi... - gi|254793801|ref|YP_003078638.1| ATP phosphoribosyltransferase [Escherichia coli O157:H7 str. TW1435...
gi|15832074, gi|... - gi|15832074|ref|NP_310847.1| ATP phosphoribosyltransferase [Escherichia coli O157:H7 str. Sakai], gi...
gi|217329547, gi... - gi|217329547|ref|ZP_03445626.1| ATP phosphoribosyltransferase [Escherichia coli O157:H7 str. TW14588...
HIS1_ECO57 - ATP phosphoribosyltransferase OS=Escherichia coli O157:H7 GN=hisG PE=3 SV=1
gi|208729034, gi... - gi|208809233|ref|ZP_03251570.1| ATP phosphoribosyltransferase [Escherichia coli O157:H7 str. EC4206]...
gi|208817178, gi... - gi|208817178|ref|ZP_03258270.1| ATP phosphoribosyltransferase [Escherichia coli O157:H7 str. EC4045]...
gi|208818490, gi... - gi|208818490|ref|ZP_03258810.1| ATP phosphoribosyltransferase [Escherichia coli O157:H7 str. EC4042]...
HIS1_ECO5E - ATP phosphoribosyltransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=hisG PE=3 SV=1
gi|189000125, gi... - gi|189000125|gb|EDU69111.1| ATP phosphoribosyltransferase [Escherichia coli O157:H7 str. EC4076], gi...
gi|189371603, gi... - gi|189371603|gb|EDU90019.1| ATP phosphoribosyltransferase [Escherichia coli O157:H7 str. EC869], gi|...
gi|189378472, gi... - gi|189378472|gb|EDU96888.1| ATP phosphoribosyltransferase [Escherichia coli O157:H7 str. EC508], gi|...
gi|195939357 - gi|195939357|ref|ZP_03084739.1| ATP phosphoribosyltransferase [Escherichia coli O157:H7 str. EC4024]
gi|12516200, gi|... - gi|15802498|ref|NP_288524.1| ATP phosphoribosyltransferase [Escherichia coli O157:H7 EDL933], gi|125...
gi|168757561, gi... - gi|189355459|gb|EDU73878.1| ATP phosphoribosyltransferase [Escherichia coli O157:H7 str. EC4401], gi...
gi|25286968, gi|... - pir||B85827 ATP phosphoribosyltransferase [imported] - Escherichia coli (strain O157:H7, substrain ...
gi|168764104, gi... - gi|189365829|gb|EDU84245.1| ATP phosphoribosyltransferase [Escherichia coli O157:H7 str. EC4501], gi...
gi|189361200, gi... - gi|189361200|gb|EDU79619.1| ATP phosphoribosyltransferase [Escherichia coli O157:H7 str. EC4486], gi...
gi|168775535, gi... - gi|187768985|gb|EDU32829.1| ATP phosphoribosyltransferase [Escherichia coli O157:H7 str. EC4196], gi...
369.0 [0..8] [309..4]
gi|238795757, gi... - gi|77962459|ref|ZP_00826279.1| COG0040: ATP phosphoribosyltransferase [Yersinia mollaretii ATCC 4396...
368.0 [0..9] [309..5]
HIS1_BLOFL - ATP phosphoribosyltransferase OS=Blochmannia floridanus GN=hisG PE=3 SV=1
368.0 [0..10] [309..6]
HIS1_YERPN - ATP phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=hisG PE=3 SV=1
gi|165923797, gi... - gi|165924737|ref|ZP_02220569.1| ATP phosphoribosyltransferase [Yersinia pestis biovar Orientalis str...
HIS1_YERPS - ATP phosphoribosyltransferase OS=Yersinia pseudotuberculosis GN=hisG PE=3 SV=1
gi|165939585, gi... - gi|89105291|ref|ZP_01177813.1| COG0040: ATP phosphoribosyltransferase [Yersinia pestis biovar Orient...
gi|166211282, gi... - gi|166211282|ref|ZP_02237317.1| ATP phosphoribosyltransferase [Yersinia pestis biovar Antiqua str. B...
HIS1_YERPA - ATP phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=hisG PE=3 SV=1
gi|166009195, gi... - gi|166009195|ref|ZP_02230093.1| ATP phosphoribosyltransferase [Yersinia pestis biovar Antiqua str. E...
gi|21959497, gi|... - gi|22126500|ref|NP_669923.1| ATP phosphoribosyltransferase [Yersinia pestis KIM], gi|21959497|gb|AAM...
HIS1_YERPS - ATP phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=hisG PE=...
gi|45436123, gi|... - gi|45441263|ref|NP_992802.1| ATP phosphoribosyltransferase [Yersinia pestis biovar Microtus str. 910...
gi|149290844, gi... - gi|149366470|ref|ZP_01888504.1| ATP phosphoribosyltransferase [Yersinia pestis CA88-4125], gi|149290...
gi|218928690, gi... - gi|218928690|ref|YP_002346565.1| ATP phosphoribosyltransferase [Yersinia pestis CO92], gi|16121822|r...
HIS1_YERPP - ATP phosphoribosyltransferase OS=Yersinia pestis (strain Pestoides F) GN=hisG PE=3 SV=1
gi|167421722, gi... - gi|167421722|ref|ZP_02313475.1| ATP phosphoribosyltransferase [Yersinia pestis biovar Orientalis str...
gi|167400242, gi... - gi|167400242|ref|ZP_02305755.1| ATP phosphoribosyltransferase [Yersinia pestis biovar Antiqua str. U...
gi|167469413 - gi|167469413|ref|ZP_02334117.1| ATP phosphoribosyltransferase [Yersinia pestis FV-1]
gi|167057192, gi... - gi|167424343|ref|ZP_02316096.1| ATP phosphoribosyltransferase [Yersinia pestis biovar Mediaevalis st...
HIS1_YERPB - ATP phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=hisG PE=3...
HIS1_YERPY - ATP phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=hisG PE=...
gi|229841531, gi... - gi|229841531|ref|ZP_04461690.1| ATP phosphoribosyltransferase [Yersinia pestis biovar Orientalis str...
HIS1_YERPE - ATP phosphoribosyltransferase OS=Yersinia pestis GN=hisG PE=3 SV=1
gi|229843642, gi... - gi|229843642|ref|ZP_04463785.1| ATP phosphoribosyltransferase [Yersinia pestis biovar Orientalis str...
gi|229703654, gi... - gi|229894256|ref|ZP_04509439.1| ATP phosphoribosyltransferase [Yersinia pestis Pestoides A], gi|2297...
HIS1_YERPG - ATP phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=hisG PE=3 SV=1
HIS1_YERP3 - ATP phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=hisG...
368.0 [0..9] [309..5]
gi|238761358, gi... - gi|238761358|ref|ZP_04622334.1| ATP phosphoribosyltransferase [Yersinia kristensenii ATCC 33638], gi...
gi|238722050, gi... - gi|77975874|ref|ZP_00831408.1| COG0040: ATP phosphoribosyltransferase [Yersinia frederiksenii ATCC 3...
HIS1_YERE8 - ATP phosphoribosyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 1317...
368.0 [0..9] [309..5]

Back

Predicted Domain #1
Region A:
Residues: [1-310]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLVNHLEDR LLFAVPKKGR LYESCVNVLK GSDIKFRRNP RLDIALVQNL PIALVFLPAA  60
   61 DIPRFVGTGR VHLGITGQDQ IAEARLRIGD KLKIEELVDL QFGGCKLQVQ VPESGDITSV 120
  121 DQLVGRRIVT SFEYLVAEYF DKVEKKAKSE GKVDSGIKTE ISFVSGSVEA SCALGIADAV 180
  181 VDLVESGETM RASGLKPIET VMSTSAVLVR SSNCSSELEP LLQTIITRIR GYIIAQQYVL 240
  241 VNYNVNREHL PVVLKITPGK RAPTITTLDE PGWVAVSSMV VKKEVAQVMD KLSQNHAHDI 300
  301 LVLSIDNSRP 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 103.0
Match: 1h3dA
Description: STRUCTURE OF THE E.COLI ATP-PHOSPHORIBOSYLTRANSFERASE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ATP phosphoribosyltransferase activity 1.91045033958508 bayes_pls_golite062009
nucleic acid binding 0.411352163551675 bayes_pls_golite062009
transcription factor activity 0.388220094901111 bayes_pls_golite062009
DNA binding 0.381460145340259 bayes_pls_golite062009
transcription regulator activity 0.264041862712904 bayes_pls_golite062009
transferase activity, transferring pentosyl groups 0.136083454159139 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle