| Protein: | gpt2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 446 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gpt2.
| Description | E-value | Query Range |
Subject Range |
|
|
387.0 | [0..14] | [446..999] |
|
|
318.0 | [0..14] | [446..30] |
|
|
313.0 | [0..3] | [445..11] |
|
|
305.0 | [0..3] | [445..13] |
|
|
305.0 | [0..3] | [445..13] |
|
|
304.0 | [0..3] | [446..13] |
|
|
299.0 | [0..5] | [446..4] |
|
|
299.0 | [0..3] | [445..10] |
|
|
297.0 | [0..3] | [445..13] |
|
|
284.0 | [0..22] | [442..7] |
|
Region A: Residues: [1-114] |
1 11 21 31 41 51
| | | | | |
1 MIESCFNVGI WATGLALLMN QGQSPLLSNV GLSVLAYKAT AMFIPRVGPS FIKRGFSGKD 60
61 MNKVEKYVIP ETMGAVSALV YFMCMIIFIP VLFYKYLVPN HNPNLPSDGS VAEV
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.732 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.678 | N/A | N/A | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.622 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.577 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.531 | N/A | N/A | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
|
Region A: Residues: [115-322] |
1 11 21 31 41 51
| | | | | |
1 AKSQFPHDLL GAYLSALLSI LSVSLLGILD DLFDIRWRHK FFLPAIAAIP LLVVYYVDYG 60
61 VTYVSVPSIV RPFLKRSLIN LGFLYYFYMA AVAIFCPNSI NIIAGVNGVE AGQSLVLALV 120
121 IACNDLFYVL SPKNKDALRA HLLSLYLVLP LIGVTAGLLK YNWWPSRVFV GDTFCYFAGM 180
181 VMAVVGILGH FSKTLMLFFI PQIFNFAL
|
| Detection Method: | |
| Confidence: | 87.468521 |
| Match: | PF00953.12 |
| Description: | No description for PF00953.12 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [323-446] |
1 11 21 31 41 51
| | | | | |
1 SVPQLFGLVE CPRHRLPKLN VKTGLLENSY TEFSLNEHPL PKKTLLTISI FEKLRLIRVE 60
61 YDPSTGRPLR CTNFTIINFV LYHLGPMRED HLTICIMGLQ LLTGIFGLII RHFVAPLVYP 120
121 EDNI
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.495 | N/A | N/A | d.200.1 | Integrin beta tail domain |
| View | Download | 0.405 | N/A | N/A | b.1.2 | Fibronectin type III |
| View | Download | 0.401 | N/A | N/A | d.95.2 | Homing endonucleases |
| View | Download | 0.383 | N/A | N/A | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.332 | N/A | N/A | d.52.1 | Alpha-lytic protease prodomain |
