| Protein: | gar2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 500 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gar2.
| Description | E-value | Query Range |
Subject Range |
|
|
280.0 | [0..77] | [496..8] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MAKKDKTSVK KSVKETASKK GAIEKPSKSK KITKEAAKEI AKQSSKTDVS PKKSKKEAKR 60
61 ASSPEPSKKS VKKQKKSKKK EESSSESESE SSSSESESSS SESESSSSES ESSSSESSS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [120-257] |
1 11 21 31 41 51
| | | | | |
1 SESEEEVIVK TEEKKESSSE SSSSSESEEE EEAVVKIEEK KESSSDSSSE SSSSESESES 60
61 SSSESEEEEE VVEKTEEKKE GSSESSSDSE SSSDSSSESG DSDSSSDSES ESSSEDEKKR 120
121 KAEPASEERP AKITKPSQ
|
| Detection Method: | |
| Confidence: | 1.04 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [258-500] |
1 11 21 31 41 51
| | | | | |
1 DSNETCTVFV GRLSWNVDDQ WLGQEFEEYG TIVGARVIMD GQSGRSKGYG YVDFETPEAA 60
61 KAAVAANGTK EIDGRMVNLD LSNPRPANPQ PYAQQRAGNF GDQLSEPSDT VFVGNLSFNA 120
121 TEDDLSTAFG GCGDIQSIRL PTDPQSGRLK GFGYVTFSDI DSAKKCVEMN GHFIAGRPCR 180
181 LDFSTPRTGG GSRGGRGGFG GRGGFGGRGG FGGGRGRGRG GARSGNPNRG SVAPFSGNKV 240
241 TFD
|
| Detection Method: | |
| Confidence: | 36.522879 |
| Match: | 1pgzA |
| Description: | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
