YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBPB2B2.10c
Organism:	Schizosaccharomyces pombe
Length:	369 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBPB2B2.10c.

Description	E-value	Query Range	Subject Range
orf19.11159, orf... - GAL7 CGDID:CAL0000451 Assembly 19, Contig19-10186 (38913, 40073) CDS, translated using codon table 1... gi\|46435246, gi\|... - gi\|68484688\|ref\|XP_713735.1\| hypothetical protein CaO19.11159 [Candida albicans SC5314], gi\|68484619...	431.0	[0..3]	[368..20]
GAL7 - Galactose-1-phosphate uridyl transferase, synthesizes glucose-1-phosphate and UDP-galactose from UDP... gi\|151946411 - gi\|151946411\|gb\|EDN64633.1\| galactose-1-phosphate uridyl transferase [Saccharomyces cerevisiae YJM78... GAL7_YEAST - Galactose-1-phosphate uridylyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) G... gi\|207347791 - gi\|207347791\|gb\|EDZ73857.1\| YBR018Cp-like protein [Saccharomyces cerevisiae AWRI1631]	428.0	[0..1]	[369..1]
gi\|43564 - gi\|43564\|emb\|CAA46730.1\| galactose-1-phosphate uridyltransferase [Haemophilus influenzae]	424.0	[0..6]	[368..5]
gi\|229845871, gi... - gi\|229845871\|ref\|ZP_04465983.1\| galactose-1-phosphate uridylyltransferase [Haemophilus influenzae 7P... gi\|46133149 - gi\|46133149\|ref\|ZP_00156675.2\| COG1085: Galactose-1-phosphate uridylyltransferase [Haemophilus influ... gi\|229812402, gi... - gi\|229844688\|ref\|ZP_04464827.1\| galactose-1-phosphate uridylyltransferase [Haemophilus influenzae 6P... gi\|148826535, gi... - gi\|148826535\|ref\|YP_001291288.1\| galactose-1-phosphate uridylyltransferase [Haemophilus influenzae P... gi\|68057614, gi\|... - gi\|68249415\|ref\|YP_248527.1\| galactose-1-phosphate uridylyltransferase [Haemophilus influenzae 86-02... gi\|145272707, gi... - gi\|145638378\|ref\|ZP_01793988.1\| galactose-1-phosphate uridylyltransferase [Haemophilus influenzae Pi...	423.0	[0..6]	[368..5]
gi\|12721369, gi\|... - gi\|15602901\|ref\|NP_245973.1\| galactose-1-phosphate uridylyltransferase [Pasteurella multocida subsp....	423.0	[0..1]	[368..1]
GAL7_HAEIN - Galactose-1-phosphate uridylyltransferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 /... GAL7_HAEIN - Galactose-1-phosphate uridylyltransferase OS=Haemophilus influenzae GN=galT PE=3 SV=2	423.0	[0..6]	[368..5]
gi\|49653449 - gi\|49653449\|emb\|CAG85821.1\| DEHA2C02376p [Debaryomyces hansenii] gi\|50418484, gi\|... - gi\|50418484\|ref\|XP_457783.1\| hypothetical protein DEHA0C02662g [Debaryomyces hansenii CBS767], gi\|49...	422.0	[0..3]	[369..2]
gi\|28899173, gi\|... - gi\|28899173\|ref\|NP_798778.1\| galactose-1-phosphate uridylyltransferase [Vibrio parahaemolyticus RIMD... gi\|28807397 - gi\|28807397\|dbj\|BAC60662.1\| galactose-1-phosphate uridylyltransferase [Vibrio parahaemolyticus RIMD ...	422.0	[0..1]	[367..1]
gi\|2624639 - gi\|2624639\|pdb\|1HXQ\|A Chain A, The Structure Of Nucleotidylated Galactose-1-Phosphate Uridylyltransf...	422.0	[0..5]	[367..3]
gi\|170020904, gi... - gi\|170020904\|ref\|YP_001725858.1\| galactose-1-phosphate uridylyltransferase [Escherichia coli ATCC 87... gi\|170080417, gi... - gi\|170080417\|ref\|YP_001729737.1\| galactose-1-phosphate uridylyltransferase [Escherichia coli str. K-... gi\|157158334, gi... - gi\|75189772\|ref\|ZP_00703039.1\| COG1085: Galactose-1-phosphate uridylyltransferase [Escherichia coli ... gi\|89107609, gi\|... - gi\|89107609\|ref\|AP_001389.1\| galactose-1-phosphate uridylyltransferase [Escherichia coli str. K-12 s... GAL7_ECOLI - Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) (Gal-1-P uridylyltransferase) (UDP-glucose--... gi\|157160233, gi... - gi\|75194911\|ref\|ZP_00704981.1\| COG1085: Galactose-1-phosphate uridylyltransferase [Escherichia coli ... gi\|75235775, gi\|... - gi\|75235775\|ref\|ZP_00719930.1\| COG1085: Galactose-1-phosphate uridylyltransferase [Escherichia coli ... gi\|188494921, gi... - gi\|75511360\|ref\|ZP_00734045.1\| COG1085: Galactose-1-phosphate uridylyltransferase [Escherichia coli ... EG10366 - galactose-1-phosphate uridylyltransferase / Galactose-1-phosphate uridylyltransferase; Rob regulon, ... gi\|238900016, gi... - gi\|238900016\|ref\|YP_002925812.1\| galactose-1-phosphate uridylyltransferase [Escherichia coli BW2952]... EG10366 - galactose-1-phosphate uridylyltransferase / Galactose-1-phosphate uridylyltransferase; Rob regulon, ... gi\|124531875, gi... - gi\|124531875\|ref\|ZP_01701974.1\| galactose-1-phosphate uridylyltransferase [Escherichia coli B], gi\|1...	422.0	[0..5]	[367..3]

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Predicted Domain #1

Region A:
Residues: [1-369]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSKKFDFTE YSHRRYNPLT DSYVLCSPHR AKRPWQGAKE EIKKDDTVKY DPTCYLCPGN  60
   61 IRATGFENPK YETTYVFPND YPAVRVDQPD YMQDESEITK GNTLKTRMFK TEGVKGKCFV 120
  121 ICFCPNHNLT LPLMSAEAIC NVVETWKHLY VTLKKESLEG PIRYKYLQIF ENKGSAMGCS 180
  181 NPHPHGQAWC LDVIPSVVAQ EMCNMTKYFE LNNSHLLGDY VKLEMLEKER IVVENDSFIV 240
  241 VVPYWALWPF ETLLIAKEHL KSLEEFEEKQ KVDLASALKM LTTKYDNLFN TSFPYSMGLH 300
  301 QAPLYGSNEE VENSWFHMHF YPPLLRSATV KKFCVGFEML GEPQRDLTSE QAAARLQELD 360
  361 GQKHYKNLL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	119.0
Match:	1hxqA
Description:	Galactose-1-phosphate uridylyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
UDP-glucose:hexose-1-phosphate uridylyltransferase activity	3.48198730005073	bayes_pls_golite062009
uridylyltransferase activity	3.010722744037	bayes_pls_golite062009
binding	1.04488831222217	bayes_pls_golite062009
nucleic acid binding	0.724655038971066	bayes_pls_golite062009
UTP-monosaccharide-1-phosphate uridylyltransferase activity	0.709923893375206	bayes_pls_golite062009
hydrolase activity	0.244163480778763	bayes_pls_golite062009
catalytic activity	0.096119422680995	bayes_pls_golite062009
glucose binding	0.0395272923745802	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: