| Protein: | frp1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 564 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for frp1.
| Description | E-value | Query Range |
Subject Range |
|
|
318.0 | [0..27] | [563..279] |
|
|
312.0 | [0..33] | [563..339] |
|
|
310.0 | [0..33] | [563..333] |
|
|
310.0 | [0..33] | [563..332] |
|
|
309.0 | [0..33] | [563..332] |
|
Region A: Residues: [1-63] |
1 11 21 31 41 51
| | | | | |
1 MAINSSDKWT VIAICLILGI LLAFILMFWL ERFRVIIKSN AHKHDPSDKR QIWLEKYYLF 60
61 VRQ
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [64-239] |
1 11 21 31 41 51
| | | | | |
1 IYTYLVTHKV ILTLIAVPVV FAISIPFIGM QTPASSHGKQ TTQVSTGNWS KNAVAARLGF 60
61 LACGLYVTSY FFSIKNNPFA LLLISSHEKM NYVHRRLSQY AIMIGAIHGF AYIGLAAQGK 120
121 RALLTARVTI IGYVILGLMV IMIVSSLPFF RRRFYEWFFV LHHMCSIGFL ITIWLH
|
| Detection Method: | |
| Confidence: | 13.585027 |
| Match: | PF01794.10 |
| Description: | No description for PF01794.10 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [240-564] |
1 11 21 31 41 51
| | | | | |
1 HRRCVVYMKV CVAVYVFDRG CRMLRSFLNR SKFDVVLVED DLIYMKGPRP KKSFFGLPWG 60
61 AGNHMYINIP SLSYWQIHPF TIASVPSDDF IELFVAVRAG FTKRLAKKVS SKSLSDVSDI 120
121 NISDEKIEKN GDVGIEVMER HSLSQEDLVF ESSAAKVSVL MDGPYGPVSN PYKDYSYLFL 180
181 FAGGVGVSYI LPIILDTIKK QSRTVHITFV WSARSSALLN IVHKSLCEAV RYTEMNINIF 240
241 CHLTNSYPVE EVSSLNSQSA RNYSLQYLNG RPDVNDYFKD FLHATGTQTA ALASCGSDKL 300
301 LRHLKSCVNT HSPSTVDLYQ HYEEI
|
| Detection Method: | |
| Confidence: | 43.154902 |
| Match: | 1cqxA |
| Description: | Flavohemoglobin, N-terminal domain; Flavohemoglobin, central domain; Flavohemoglobin, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.13408475648113 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on NADH or NADPH, heme protein as acceptor | 0.621003175053315 | bayes_pls_golite062009 |
| protein binding | 0.144900113694048 | bayes_pls_golite062009 |
| cofactor binding | 0.0731141170494622 | bayes_pls_golite062009 |
