| Protein: | fps1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 347 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fps1.
| Description | E-value | Query Range |
Subject Range |
|
|
316.0 | [0..3] | [347..2] |
|
|
316.0 | [0..1] | [347..1] |
|
|
311.0 | [0..2] | [347..5] |
|
|
310.0 | [0..4] | [347..2] |
|
|
310.0 | [0..4] | [347..2] |
|
|
309.0 | [0..3] | [347..43] |
|
Region A: Residues: [1-347] |
1 11 21 31 41 51
| | | | | |
1 MSAVDKRAKF ESALPVFVDE IVNYLKTINI PDDVTEWYKN SLFHNTLGGK YNRGLSVIDS 60
61 YEILLGHPLD EAAYMKAAVL GWMVELLQSF FLIADDIMDA SKTRRGQPCW YLMPGVGNIA 120
121 INDAFMVESA IYFLLKKHFR QESCYVDLIE LFHDVTFQTE LGQQLDLLTA PEDSVDLSKF 180
181 SLQKHSFIVI YKTAFYSFYL PVALAMHLAG VATPENLKCA QDILIILGKY FQVQDDYLDC 240
241 YGDPTVTGKI GTDILDNKCS WIINLALAKC TPEQRVILDD NYGRKDSESE KRVKAVFEEL 300
301 NIRGEFENYE ESEVSEIKKL IDGVDESTGL KKSIFTTFLG KIYKRNK
|
| Detection Method: |  |
| Confidence: | 81.221849 |
| Match: | 1ubxA |
| Description: | STRUCTURE OF FARNESYL PYROPHOSPHATE SYNTHETASE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| prenyltransferase activity | 8.01554498091556 | bayes_pls_golite062009 |
| farnesyl-diphosphate farnesyltransferase activity | 5.04441642023356 | bayes_pls_golite062009 |
| protein prenyltransferase activity | 4.13910090627719 | bayes_pls_golite062009 |
| geranyltranstransferase activity | 3.86169009960142 | bayes_pls_golite062009 |
| transferase activity | 3.63071481728466 | bayes_pls_golite062009 |
| farnesyltranstransferase activity | 3.11591733497708 | bayes_pls_golite062009 |
| protein farnesyltransferase activity | 2.85107079482202 | bayes_pls_golite062009 |
| catalytic activity | 2.4040324437254 | bayes_pls_golite062009 |
| dimethylallyltranstransferase activity | 1.91559289231283 | bayes_pls_golite062009 |
| transferase activity, transferring alkyl or aryl (other than methyl) groups | 1.82540911622956 | bayes_pls_golite062009 |
| binding | 1.45201203247999 | bayes_pls_golite062009 |
| protein binding | 0.270583155998354 | bayes_pls_golite062009 |
