| Protein: | erg9 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 460 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for erg9.
| Description | E-value | Query Range |
Subject Range |
|
|
500.0 | [0..1] | [460..1] |
|
|
413.0 | [0..4] | [440..11] |
|
|
413.0 | [0..4] | [440..11] |
|
|
412.0 | [0..1] | [447..5] |
|
|
412.0 | [0..4] | [439..10] |
|
|
409.0 | [0..6] | [446..10] |
|
|
408.0 | [0..1] | [446..5] |
|
|
408.0 | [0..1] | [446..5] |
|
Region A: Residues: [1-399] |
1 11 21 31 41 51
| | | | | |
1 MSLANRIEEI RCLCQYKLWN DLPSYGEDEN VPQNIRRCYQ LLDMTSRSFA VVIKELPNGI 60
61 REAVMIFYLV LRGLDTVEDD MTLPLDKKLP ILRDFYKTIE VEGWTFNESG PNEKDRQLLV 120
121 EFDVVIKEYL NLSEGYRNVI SNITKEMGDG MAYYASLAEK NDGFSVETIE DFNKYCHYVA 180
181 GLVGIGLSRL FAQSKLEDPD LAHSQAISNS LGLFLQKVNI IRDYREDFDD NRHFWPREIW 240
241 SKYTSSFGDL CLPDNSEKAL ECLSDMTANA LTHATDALVY LSQLKTQEIF NFCAIPQVMA 300
301 IATLAAVFRN PDVFQTNVKI RKGQAVQIIL HSVNLKNVCD LFLRYTRDIH YKNTPKDPNF 360
361 LKISIECGKI EQVSESLFPR RFREMYEKAY VSKLSEQKK
|
| Detection Method: |  |
| Confidence: | 85.39794 |
| Match: | 1ezfA |
| Description: | Squalene synthase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| prenyltransferase activity | 5.34003736022396 | bayes_pls_golite062009 |
| farnesyl-diphosphate farnesyltransferase activity | 5.04441642023356 | bayes_pls_golite062009 |
| geranyltranstransferase activity | 3.86169009960142 | bayes_pls_golite062009 |
| farnesyltranstransferase activity | 3.11591733497708 | bayes_pls_golite062009 |
| catalytic activity | 2.4040324437254 | bayes_pls_golite062009 |
| dimethylallyltranstransferase activity | 1.91559289231283 | bayes_pls_golite062009 |
| transferase activity, transferring alkyl or aryl (other than methyl) groups | 1.82540911622956 | bayes_pls_golite062009 |
| transferase activity | 1.77738506203957 | bayes_pls_golite062009 |
| binding | 0.0206192709356209 | bayes_pls_golite062009 |
|
Region A: Residues: [400-460] |
1 11 21 31 41 51
| | | | | |
1 GNGTQKAILN DEQKELYRKD LQKLGISILF VFFIILVCLA VIFYVFNIRI HWSDFKELNL 60
61 F
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
