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View Structure Prediction Details

Protein: dsd1
Organism: Schizosaccharomyces pombe
Length: 362 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dsd1.

Description E-value Query
Range
Subject
Range
gi|39975783, gi|... - gi|39975783|ref|XP_369282.1| hypothetical protein MG06182.4 [Magnaporthe grisea 70-15], gb|EAA53054....
253.0 [0..16] [352..390]
DEGS1_XENTR - Sphingolipid delta(4)-desaturase DES1 OS=Xenopus tropicalis GN=degs1 PE=2 SV=1
236.0 [0..20] [349..1]
gi|42546433, gi|... - gi|46137717|ref|XP_390550.1| hypothetical protein FG10374.1 [Gibberella zeae PH-1], gi|42546433|gb|E...
232.0 [0..14] [352..14]
gi|116197643, gi... - gi|88178256|gb|EAQ85724.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51], gi|11619...
232.0 [0..14] [347..35]
gi|221483284 - gi|221483284|gb|EEE21603.1| membrane fatty acid desaturase, putative [Toxoplasma gondii GT1]
gi|14270087 - gi|14270087|dbj|BAB58879.1| membrane fatty acid desaturase [Toxoplasma gondii]
231.0 [0..2] [353..46]
FAD3C_RICCO - Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1
231.0 [0..22] [341..95]
gi|45385976 - gi|45385976|gb|AAS59833.1| chloroplast omega-3 desaturase [Malus x domestica]
229.0 [0..28] [342..82]
ifc-PA - The gene infertile crescent is referred to in FlyBase by the symbol Dmel\ifc (CG9078, FBgn0001941). ...
229.0 [0..25] [349..6]
DEGS1_CHICK - Sphingolipid delta(4)-desaturase DES1 OS=Gallus gallus GN=DEGS1 PE=2 SV=1
229.0 [0..26] [349..7]
gi|110084514 - gi|110084514|gb|ABG49414.1| chloroplast omega-3 fatty acid desaturase [Jatropha curcas]
229.0 [0..27] [341..97]

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Predicted Domain #1
Region A:
Residues: [1-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAESTATTTA VPPPAEESWN ADSEDVHQFY WTYTEEPHKS RRAAILKAHP EIASLNGYEP  60
   61 LTKWIVLGVV SLQFTCAYLL SQSSLLSWKF FLTAYFIGAF CNQNLFLAIH ELSHNLGFKK 120
  121 TLYNRAYCLF ANLPVGAPFA ASFRPYHMEH HAYQGV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [157-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGMDTDLPTR AELILFDNVL GKAFFCTFQL LFYAFRPLVV RRLPFTLMHF WNIIVQFSFD  60
   61 YLVVRYVGWR ALAYFFMSSF LAGSLHPTAG HFLSEHYNMT RTRLIASGPG KETPLETFSY 120
  121 YGPLNFFVYN AGYHIEHHDF PYVAWTRIGK VRELAPEFYD NIPDCKSWCG IIYQFITDSN 180
  181 VGMWCRVKRK QKHADIPTKS MHLHVS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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