| Protein: | cnd3 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 875 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cnd3.
| Description | E-value | Query Range |
Subject Range |
|
|
527.0 | [0..2] | [864..53] |
|
|
517.0 | [0..3] | [873..41] |
|
|
495.0 | [0..1] | [861..8] |
|
|
493.0 | [0..1] | [866..8] |
|
|
492.0 | [0..2] | [834..34] |
|
|
491.0 | [0..1] | [861..8] |
|
|
490.0 | [0..1] | [861..8] |
|
Region A: Residues: [1-771] |
1 11 21 31 41 51
| | | | | |
1 MSCIQIISSS QTSIAGHRKL CNKLFTLRTQ EGFETDILRA LNIILTVKKG NSNADRVLRF 60
61 LVTFVNYLQQ KDPEIDIVQP ILKHILRGLD AKDKTVRYRC CQIIARVVNC VKEIDDDLYN 120
121 TLKEKLLSRV LDRESIVRLE AVVALSRLQE DTGDEENDVR NILLFLLQND PSSEVRRSVL 180
181 LNIEVSNSTL PFILERARDV DAANRKCVYA RVLPKIGDFR YLSIKKRVRI LKWGLNDRDE 240
241 SVEKAAADML AYQWIENADN NLLELLERLD VSNNSDVAVL AIKKFFDVRV DSLSQLEFPE 300
301 QFWLELTAES SLLARTFNEI CIEKNYTDLL DKMPEVVQLT YYIERQYVSL RDKSSYDESC 360
361 FIIEQLLYIG LSQDMVDEIG RRKLLKSLTN SLSTMALPDS LISLHIELLR KLCSSENDFC 420
421 SLLVEIITEV FEQGHSQNQT EEQGNSNAPE LNKNDYEGEE ITVSQKSPSP SLPPNELNEP 480
481 EPDDMDGYKE AFNELRCLSY VQCLFENITS SLNENLYMVD MLKTLIIPAV RSHDLPIREK 540
541 GLECLSLVCL LNADLAFENV PLYLHCYEKG SVVLKCTAIR TLTDMLIQHG KAKFTEYEDA 600
601 ISSILFEALG EFENAELQTL GAEAIAKLLV ILHYRDELFL KPLIIQYFEP NTVDNHALRQ 660
661 VLGYFFPVYA FGAHENQWRI ATIFCDALLS LLEIYRDLDE DDVQLSIGHI AQQMLDWTDN 720
721 EKLYERKTQT GDDYIALNHN VHLHLANMIF ESLPNASEGK ERKFMISLLG K
|
| Detection Method: |  |
| Confidence: | 33.0 |
| Match: | 1qbkB |
| Description: | Karyopherin beta2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.91891696274037 | bayes_pls_golite062009 |
| protein binding | 1.94427330399472 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.705954065870404 | bayes_pls_golite062009 |
| nucleic acid binding | 0.169755106399802 | bayes_pls_golite062009 |
| actin binding | 0.0133067933592343 | bayes_pls_golite062009 |
|
Region A: Residues: [772-875] |
1 11 21 31 41 51
| | | | | |
1 LKIPTDLPSS DYQRTKRKLE TYESHGFTMD STSLSILAKF ERMLLQNEEA RSKFEETEEE 60
61 RLMENAEENE HAGAEAISGE IIPDTVEANM EDEEEVYVKQ EEDL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
