| Protein: | cfr1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 620 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cfr1.
| Description | E-value | Query Range |
Subject Range |
|
|
213.0 | [0..34] | [620..759] |
|
|
210.0 | [0..72] | [618..544] |
|
|
209.0 | [0..46] | [620..1364] |
|
|
196.0 | [0..49] | [619..1547] |
|
|
185.0 | [0..78] | [615..4] |
|
|
182.0 | [0..57] | [616..145] |
|
|
177.0 | [0..28] | [620..689] |
|
|
174.0 | [0..32] | [618..638] |
|
Region A: Residues: [1-172] |
1 11 21 31 41 51
| | | | | |
1 MDDTNQFMVS VAKIDAGMAI LLTPSFHIIE FPSVLLPNDA TAGSIIDISV HHNKEEEIAR 60
61 ETAFDDVQKE IFETYGQKLP SPPVLKLKNA TQTSIVLEWD PLQLSTARLK SLCLYRNNVR 120
121 VLNISNPMTT HNAKLSGLSL DTEYDFSLVL DTTAGTFPSK HITIKTLRMI DL
|
| Detection Method: |  |
| Confidence: | 1.07 |
| Match: | 1wfoA |
| Description: | The eighth FN3 domain of human sidekick-2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 2.42181781846337 | bayes_pls_golite062009 |
| binding | 1.91252838098228 | bayes_pls_golite062009 |
| receptor activity | 0.36292763239647 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.239312512917867 | bayes_pls_golite062009 |
| cytokine binding | 0.23854252705133 | bayes_pls_golite062009 |
|
Region A: Residues: [173-298] |
1 11 21 31 41 51
| | | | | |
1 TGIQVCVGNM VPNEMEALQK CIERIHARPI QTSVRIDTTH FICSSTGGPE YEKAKAANIP 60
61 ILGLDYLLKC ESEGRLVNVS GFYIENRASY NANASINSVE AAQNAAPNLN ATTEQPKNTA 120
121 EVAQGA
|
| Detection Method: | |
| Confidence: | 1.41 |
| Match: | 2d8mA |
| Description: | No description for 2d8mA was found. |
|
Region A: Residues: [299-416] |
1 11 21 31 41 51
| | | | | |
1 ASAKAPQQTT QQGTQNSANA EPSSSASVPA EAPETEAEQS IDVSSDIGLR SDSSKPNEAP 60
61 TSSENIKADQ PENSTKQENP EEDMQIKDAE EHSNLESTPA AQQTSEVEAN NHQEKPSS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [417-620] |
1 11 21 31 41 51
| | | | | |
1 LPAVEQINVN EENNTPETEG LEDEKEENNT AAESLINQEE TTSGEAVTKS TVESSANEEE 60
61 AEPNEIIEEN AVKSLLNQEG PATNEEVEKN NANSENANGL TDEKIIEAPL DTKENSDDDK 120
121 PSPAAAEDIG TNGAIEEIPQ VSEVLEPEKA HTTNLQLNAL DKEEDLNITT VKQSSEPTAD 180
181 DNLIPNKEAE IIQSSDEFES VNID
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
