| Protein: | cdc45 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 638 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cdc45.
| Description | E-value | Query Range |
Subject Range |
|
|
739.0 | [0..1] | [632..1] |
|
|
738.0 | [0..1] | [632..1] |
|
|
736.0 | [0..1] | [632..1] |
|
|
735.0 | [0..1] | [632..1] |
|
|
733.0 | [0..1] | [632..1] |
|
|
733.0 | [0..1] | [638..1] |
|
|
730.0 | [0..1] | [632..1] |
|
Region A: Residues: [1-303] |
1 11 21 31 41 51
| | | | | |
1 MFIKRSDYAS AYLKIKEASV SGGCTVQLFV ALDPDALCAC KLLSTLLKGD FISHKIRPVS 60
61 GYRDLEQANK TLLEQNEDIK FIILLNCGTM VDLNNYLVSM EDVSIYVIDS HRPHNLNNIY 120
121 IENNIFVFDD GDIEEDMNKI HDAWYAFNSH ELSDEENSDS SNEREEEVED DNRSVESYSS 180
181 SDYQARSRRR FSEETTQRRA EIKEKRKKRK EFASILSEYY EKGSWYGESI TNILFAVASM 240
241 LGREDNDMLW LAIVGLTCLE IHCQSSKKYF NRSYSLLKDE VNRLNPSPLE NQIVGRAHGK 300
301 TPH
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [304-428] |
1 11 21 31 41 51
| | | | | |
1 DQSIRLEDEF RFMLVRHWSL YDSMLHSAYV GSRLHIWSEE GRKRLHKLLA KMGLSLVECK 60
61 QTYIHMNMDL KKTLKSSLKR FAPFYGLDDV IFHSFTRTYG FKCTLSASDV SYAISALLEM 120
121 GNTGV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.245 | 0.914 | DNA replication initiation | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.241 | 0.032 | cytosol | a.1.1 | Globin-like |
| View | Download | 0.324 | 0.003 | DNA replication initiation | d.80.1 | Tautomerase/MIF |
| View | Download | 0.237 | 0.000 | DNA replication initiation | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.271 | N/A | N/A | d.198.2 | Arp2/3 complex subunits |
|
Region A: Residues: [429-638] |
1 11 21 31 41 51
| | | | | |
1 LLQSKTVARS PDMTEEEYLE KFENAQNQEW LHNFYDAYDA LDDVDSLERA LKLAMHLQRA 60
61 IVRTGITLLE KRAIKTLRSF RFGLINEGPD LKIFMHPLAL TKMSLWIAEA INEQEREFGK 120
121 LRHLPLVLAA FVEEKNRYLI VGTSTSAFTS NEDDDDDDGH GHNRFGVAFQ EVANMTSATL 180
181 QMDCFEASVI ECQKSDLGVF LESLSFKTLL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
