YRC Public Data Repository - Protein Structure Prediction

Protein:	alg6
Organism:	Schizosaccharomyces pombe
Length:	506 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for alg6.

Description	E-value	Query Range	Subject Range
gi\|44981446 - gi\|44981446\|gb\|AAS51231.1\| ACR004Wp [Ashbya gossypii ATCC 10895] gi\|45185691, gi\|... - gi\|45185691\|ref\|NP_983407.1\| ACR004Wp [Ashbya gossypii ATCC 10895], gi\|44981446\|gb\|AAS51231.1\| ACR00...	544.0	[0..2]	[500..35]
gi\|38109667, gi\|... - gi\|39959120\|ref\|XP_364465.1\| hypothetical protein MGG_09310 [Magnaporthe grisea 70-15], gb\|EAA55503....	540.0	[0..10]	[504..45]
gi\|42550939, gi\|... - gi\|46122459\|ref\|XP_385783.1\| hypothetical protein FG05607.1 [Gibberella zeae PH-1], gi\|42550939\|gb\|E...	531.0	[0..8]	[497..42]
gi\|88185887, gi\|... - gi\|88185887\|gb\|EAQ93355.1\| hypothetical protein CHGG_01590 [Chaetomium globosum CBS 148.51], gi\|1161...	522.0	[0..8]	[505..39]
gi\|49095080, gi\|... - gi\|67537388\|ref\|XP_662468.1\| hypothetical protein AN4864.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	514.0	[0..8]	[505..40]
gi\|56205297, gi\|... - gi\|56205297\|emb\|CAI18961.1\| asparagine-linked glycosylation 6 homolog (S. cerevisiae, alpha-1,3-gluc...	505.0	[0..22]	[505..1]
gi\|85113262 - gi\|85113262\|ref\|XP_964494.1\| hypothetical protein NCU03317 [Neurospora crassa OR74A] gi\|28926278, gi\|... - gi\|32420619\|ref\|XP_330753.1\| hypothetical protein [Neurospora crassa], gi\|28926278\|gb\|EAA35258.1\| hy...	504.0	[0..10]	[504..13]
gi\|114556965 - gi\|114556965\|ref\|XP_513454.2\| PREDICTED: asparagine-linked glycosylation 6 isoform 2 [Pan troglodyte...	503.0	[0..22]	[505..1]
ALG6_YEAST - Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase OS=Saccharomyces cerevisiae (strain... ALG6 - Alpha 1,3 glucosyltransferase, involved in transfer of oligosaccharides from dolichyl pyrophosphate ...	503.0	[0..3]	[500..14]

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Predicted Domain #1

Region A:
Residues: [1-133]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSEFENGAP VQQFVSRFRS YSSKFLFFPC LIMSLVFMQW LISIGPYSGY NTPPMYGDFE  60
   61 AQRHWMELTL HTPVSQWYFR DLQWWGLDYP PLTAYVSWFF GIIGHYFFNP EWFADVTSRG 120
  121 FESLELKLFM RST

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [134-242]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VIASHLLILV PPLMFYSKWW SRRIPNFVDR NASLIMVLFQ PALLLIDHGH FQYNCVMLGL  60
   61 VMYAIANLLK NQYVAATFFF CLALTFKQMA LYFAPPIFFY LLGTCVKPK

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [243-329]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IRFSRFILLS VTVVFTFSLI LFPWIYMDYK TLLPQILHRV FPFARGLWED KVANFWCTLN  60
   61 TVFKIREVFT LHQLQVISLI FTLISIL

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4

Region A:
Residues: [330-506]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSCVILFLYP RKRLLALGFA SASWGFFLFS FQVHEKSVLL PLLPTSILLC HGNITTKPWI  60
   61 ALANNLAVFS LWPLLKKDGL GLQYFTLVLM WNWIGDMVVF SKNVLFRFIQ LSFYVGMIVI 120
  121 LGIDLFIPPP SRYPDLWVIL NVTLSFAGFF TIYLWTLGRL LHISSKLSTD LRNKKEA

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits