| Protein: | Hlc-PA, FBpp0310396 |
| Organism: | Drosophila melanogaster |
| Length: | 560 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Hlc-PA, FBpp0310396.
| Description | E-value | Query Range |
Subject Range |
|
|
367.0 | [0..2] | [411..586] |
|
Region A: Residues: [1-405] |
1 11 21 31 41 51
| | | | | |
1 MSQMTQKTVQ FHELELDQRI LKAVAQLGWQ QPTLIQSTAI PLLLEGKDVV VRARTGSGKT 60
61 ATYALPLIQK ILNSKLNASE QYVSAVVLAP TKELCRQSRK VIEQLVESCG KVVRVADIAD 120
121 SSNDTVTQRH ALSESPDIVV ATPANLLAYA EAGSVVDLKH VETLVVDEAD LVFAYGYEKD 180
181 FKRLIKHLPP IYQAVLVSAT LTDDVVRMKG LCLNNPVTLK LEEPELVPQD QLSHQRILAE 240
241 ENDKPAILYA LLKLRLIRGK SIIFVNSIDR CYKVRLFLEQ FGIRACVLNS ELPANIRIHT 300
301 ISQFNKGTYD IIIASDEHHM EKPGGKSATN RKSPRSGDME SSASRGIDFQ CVNNVINFDF 360
361 PRDVTSYIHR AGRTARGNNK GSVLSFVSMK ESKVNDSVEK KLCDS
|
| Detection Method: |  |
| Confidence: | 86.69897 |
| Match: | 2db3A |
| Description: | No description for 2db3A was found. |
|
Region A: Residues: [406-478] |
1 11 21 31 41 51
| | | | | |
1 FAAQEGEQII KNYQFKMEEV ESFRYRAQDC WRAATRVAVH DTRIREIKIE ILNCEKLKAF 60
61 FEENKRDLQA LRH
|
| Detection Method: | |
| Confidence: | 14.522879 |
| Match: | 1d9xA |
| Description: | Nucleotide excision repair enzyme UvrB |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [479-560] |
1 11 21 31 41 51
| | | | | |
1 DKPLRAIKVQ SHLSDMPEYI VPKALKRVVG TSSSPVGASE AKQPRQSAAK AAFERQVNDP 60
61 LMASQVDFGK RRPAHRRKKK AL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
