| Protein: | fliI-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1256 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fliI-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
1197.0 | [0..4] | [1256..4] |
|
Region A: Residues: [1-511] |
1 11 21 31 41 51
| | | | | |
1 MSVLPFVRGV DFTKNDFSAT FPSSMRQMSR VQWLTLDRTQ LAEIPEELGH LQKLEHLSLN 60
61 HNRLEKIFGE LTELSCLRSL DLRHNQLKNS GIPPELFHLE ELTTLDLSHN KLKEVPEGLE 120
121 RAKNLIVLNL SNNQIESIPT PLFIHLTDLL FLDLSHNRLE TLPPQTRRLI NLKTLDLSHN 180
181 PLELFQLRQL PSLQSLEVLK MSGTQRTLLN FPTSIDSLAN LCELDLSHNS LPKLPDCVYN 240
241 VVTLVRLNLS DNELTELTAG VELWQRLESL NLSRNQLVAL PAALCKLPKL RRLLVNDNKL 300
301 NFEGIPSGIG KLGALEVFSA ANNLLEMVPE GLCRCGALKQ LNLSCNRLIT LPDAIHLLEG 360
361 LDQLDLRNNP ELVMPPKPSE ASKATSLEFY NIDFSLQTQL RLAGAAVPPS MPSSATPKDS 420
421 TARKIRLRRG PRSEGDQDAA KVLKGMKDVA KDKDNEAGAV PEDGKPESLK PKRWDESLEK 480
481 PQLDYSKFFE KDDGQLPGLT IWEIENFLPN K
|
| Detection Method: |  |
| Confidence: | 52.154902 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [512-1256] |
1 11 21 31 41 51
| | | | | |
1 IEEVVHGKFY EGDCYIVLKT KFDDLGLLDW EIFFWIGNEA TLDKRACAAI HAVNLRNFLG 60
61 ARCRTVREEQ GDESEQFLSL FETEVIYIEG GRTATGFYTI EEMIHITRLY LVHAYGATIH 120
121 LEPVAPAITS LDPRHAFVLD LGTHIYIWMG ERSKNTLNSK ARLMAEKISK TERKNKCEIQ 180
181 LERQGEESAE FWQGLGMTSE EADAAEPPKE HVPEDYQPVQ PRLYQVQLGM GYLELPQVEL 240
241 PEQKLCHTLL NSKHVYILDC YTDLFVWFGK KSTRLVRAAA VKLSRELFNM MDRPDYALVM 300
301 RVPEGNEMQI FRTKFAGWDE VMAVDFTRTA KSVAKTGANL TQWARQQETR TDLAALFMPR 360
361 QSAMPLAEAE QLEEEWNYDL EMMEAFVLEN KKFVRLPEEE LGRFYTGECY VFLCRYCIPI 420
421 EEPENGSEDG ANPAADVSKS SANNQPEDEI QCVVYFWQGR NAGNMGWLTF TFTLQKKFKA 480
481 MFGEELEVVR IFQQQENLKF MSHFKRKFII HTGKRKDKAH TAKGKSPVEF FHLRSNGGAL 540
541 TTRLIQINPD AVHLNSTFCY ILHVPFETED DSQSGIVYVW IGSKACNEEA KLVQDIAEQM 600
601 FNSPWVSLQI LNEGDEPENF FWVALGGRKP YDTDAEYMNY TRLFRCSNER GYYTVAEKCA 660
661 DFCQDDLADD DIMILDNGEH VFLWMGPRCS EVEVKLAYKS AQVYIQHMRI KQPERPRKLF 720
721 LTMKNKESRR FTKCFHGWSA FKVYL
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 1d0nA |
| Description: | Gelsolin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 7.52071741004022 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 6.04859625643932 | bayes_pls_golite062009 |
| actin filament binding | 5.45532510538573 | bayes_pls_golite062009 |
| protein binding | 2.93027234013365 | bayes_pls_golite062009 |
| binding | 2.84811181543046 | bayes_pls_golite062009 |
| receptor binding | 0.962009853725232 | bayes_pls_golite062009 |
| phosphatidylinositol-4,5-bisphosphate binding | 0.817788495705601 | bayes_pls_golite062009 |
| phosphatidylserine binding | 0.626075311511349 | bayes_pls_golite062009 |
| signal transducer activity | 0.535442033390394 | bayes_pls_golite062009 |
| molecular transducer activity | 0.535442033390394 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.482954032096802 | bayes_pls_golite062009 |
| structural molecule activity | 0.391701411061931 | bayes_pls_golite062009 |
| growth factor activity | 0.374562808799 | bayes_pls_golite062009 |
| actin monomer binding | 0.224304003054399 | bayes_pls_golite062009 |
