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View Structure Prediction Details

Protein: CG11710-PA
Organism: Drosophila melanogaster
Length: 436 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11710-PA.

Description E-value Query
Range
Subject
Range
CG11710-PB, FBpp... - This gene is referred to in FlyBase by the symbol Dmel\CG11710 (CG11710, FBgn0031115). It is a prote...
581.0 [0..1] [434..1]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENFLRGTLS KCLDCVITDQ MLAAILNIKD DYEFDNYFGN LLSEDNEEHR MFLVNCRRML  60
   61 LSGKQPRNNG KYLSPPLAPT SPNCPKQNIS KGAKGKSGKH VNLY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [105-228]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASDGRVQGDT IILKGRRHCD CQAGQHKLIN NCLGCGRIVC EQEGSGPCLS CGDPVRTPEE  60
   61 EQQLAKAARE KGGTKSAAKQ GKKSTKELST QALDKALAQR DRLLEYDKNS EKRTTVIDDE 120
  121 LDYF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.16
Match: 1y02A
Description: Crystal Structure of a FYVE-type domain from caspase regulator CARP2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.148252783584283 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [229-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QENSVWLSDA EREKFEKLHR EMEEVKHGSR MKRKIRVDFA GRELPEEPTI SKEYEQQVIS  60
   61 ELAAVSKASG VGSNWSASSV TGHSALTLAP HLNMTKPPVY KPSKESKSWP APAAGSDWLE 120
  121 RTYNR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [354-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VQDKELLEMQ DMRQCLSMHQ PWASLLVAGI KKHEGRVWYS EHRGRLWIAS TSKEPHAEDI  60
   61 AQMEGFYKIP TLSFQVIIPQ AVC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 2dp9A
Description: No description for 2dp9A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle