YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG11710-PA
Organism: Drosophila melanogaster
Length: 436 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11710-PA.

Description E-value Query
Range
Subject
Range
CG11710-PB, FBpp... - This gene is referred to in FlyBase by the symbol Dmel\CG11710 (CG11710, FBgn0031115). It is a prote...
581.0 [0..1] [434..1]

Back

Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENFLRGTLS KCLDCVITDQ MLAAILNIKD DYEFDNYFGN LLSEDNEEHR MFLVNCRRML  60
   61 LSGKQPRNNG KYLSPPLAPT SPNCPKQNIS KGAKGKSGKH VNLY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [105-228]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASDGRVQGDT IILKGRRHCD CQAGQHKLIN NCLGCGRIVC EQEGSGPCLS CGDPVRTPEE  60
   61 EQQLAKAARE KGGTKSAAKQ GKKSTKELST QALDKALAQR DRLLEYDKNS EKRTTVIDDE 120
  121 LDYF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.16
Match: 1y02A
Description: Crystal Structure of a FYVE-type domain from caspase regulator CARP2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.148252783584283 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [229-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QENSVWLSDA EREKFEKLHR EMEEVKHGSR MKRKIRVDFA GRELPEEPTI SKEYEQQVIS  60
   61 ELAAVSKASG VGSNWSASSV TGHSALTLAP HLNMTKPPVY KPSKESKSWP APAAGSDWLE 120
  121 RTYNR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [354-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VQDKELLEMQ DMRQCLSMHQ PWASLLVAGI KKHEGRVWYS EHRGRLWIAS TSKEPHAEDI  60
   61 AQMEGFYKIP TLSFQVIIPQ AVC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 2dp9A
Description: No description for 2dp9A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle