| Protein: | dome-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1282 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dome-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
539.0 | [0..5] | [964..193] |
|
Region A: Residues: [1-326] |
1 11 21 31 41 51
| | | | | |
1 MVAQEQLVLL LMLLAGCRGG ANAILDPGWV IPSKVEQLIG GDFNLSCTLN EDYFNGKSAE 60
61 DCPVEKLYFT GGGRVYRDSK HIRILNNTTI LFSDTNAVEQ ENDYHCMCDE YVINKSKVYV 120
121 GTRPLLVRDF NCLDYDFQFM VCNFTQPPNT VITKYNISYN TNNDWRYSNT LDCNFDSAPV 180
181 VTCNLTDDNY KRFSETFYFR LSISNALGHE TQPITINHFE RLVPARPGQN LTLLNRTESS 240
241 VCLSWEMPRR SNYNRGLVWQ VRVTPQNFEP ITRPSWRNHT LTIKDTLCLT ELPFAGYNYT 300
301 LRVRVRANQN NTLWSEPMIY AFATAP
|
| Detection Method: |  |
| Confidence: | 33.30103 |
| Match: | 1fnfA |
| Description: | FRAGMENT OF HUMAN FIBRONECTIN ENCOMPASSING TYPE-III REPEATS 7 THROUGH 10 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [327-1015] |
1 11 21 31 41 51
| | | | | |
1 APPRRPPRVT YGSFYVYSSE KAMRFYWEPL EEHELNGPDF RYSISEYRIN GTAVDPGLIK 60
61 VESNSAMIDH WSMSAVHHFL IRSSNSQGLS VNATPMTIGP ISNRDFKVRE PRNIRSVYHP 120
121 TNKSYTLSWD PPSDQRELQN YTVFWCVPKP GLQSECEGSI RFAEVASGLH HFTTSPDQLL 180
181 TLHMAVSANY QSHNTGLHWA ICSSDKKDDL AKMEPSIDVA TSTSLTVSWS ERVCAVILAG 240
241 YNLTYCQRSA GRPDNCTTVT IDRYTNKHVI QNLVPYTDYS VKMLMYSDSR VSKYSDELVN 300
301 RTGEAAPSQP RELQLIRVTS DSVELAWKPP LLANGVVRAY EGTFRSLHDN VTDTFRVSAS 360
361 ADELVNNEKP ITYRLGNLTA FTKYEISVRA RTVYPSEPSN VILFSTAIGV PSPPQLYVIN 420
421 NPDQSSRLDW EPPRTPAGRI DFYEISLRDN NASCLTSTIL PGRNLSYVMA TPRCTSHNPF 480
481 QLAVRAINVE QHPQLNGADA AEGAVLLMST NGKGCEARTD ALGEEERLQF EAYAANMTAY 540
541 RLYRSDWGIY GFICTPDTHS VKAMYQTIEV TVAILVLGVI FYLVYKKYRK MSDIGLVLPQ 600
601 GIMETMKKPI DMGGLGLGLG PDSSVSGGIV CTRVDDSPPY TPQDLPHDFS SCGSESSKLL 660
661 LRTASSSGGG GCVDRDGYDD NHETGPISA
|
| Detection Method: | |
| Confidence: | 36.0 |
| Match: | 2v5yA |
| Description: | No description for 2v5yA was found. |
|
Region A: Residues: [1016-1282] |
1 11 21 31 41 51
| | | | | |
1 VGPPTSYLAM RHGLLVQNDR ERERERDREQ EREREQQQQQ RESEMDREQS CTNGYIKPTQ 60
61 MKSWGGNGPS DNDHTFSVPS TAMTAPMSQP LSQIPLSGYV PVPIPQSRFN PAPVQPFGSP 120
121 AVPSAATAAA ASTFFPPAHL LNMDNYVQAS DLHKLKPLVA APLSQTGGPA FAGSSPATSP 180
181 PLQLPPVHAA SPAAATPKMA DIGYTTMEQL QLTGLIKPPL AATVGSPTHA AGGAPGGGNQ 240
241 HSRLQPQING YVTPQDLNAM AHNRHVL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
