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View Structure Prediction Details

Protein: Grip84-PC, FBpp0...
Organism: Drosophila melanogaster
Length: 819 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Grip84-PC, FBpp0....

Description E-value Query
Range
Subject
Range
Grip84-PB - The gene gamma-tubulin ring protein 84 is referred to in FlyBase by the symbol Dmel\Grip84 (CG3917, ...
635.0 [0..1] [819..1]

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Predicted Domain #1
Region A:
Residues: [1-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYALLVFVER YSECKPVSES SSSTSLSAMG LPHGNKTSDV NSAAGSVPTT LAIASTSTIL  60
   61 TTSQNVSGST RLSLTQSQDF PTSTPVNCKK ATESDTTPVV FVRRGPMDRN RGAGKDERND 120
  121 LSVIKERVLN AVSDQSLSGY RSVTNKTGNS PKSMPNDLVT LTDVPDEYRT HLLWEYYKVD 180
  181 GDKVPRAEIA A

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.01
Match: 2fj7I
Description: No description for 2fj7I was found.

Predicted Domain #2
Region A:
Residues: [192-399]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLLSQESML LDELLHCLTG IRESLLVPQK PIISAVGLAK YDTDFDIHTH LDRSLTHQVR  60
   61 EILPLASYFM GVQKIIAATD GLGQVMNSLN EALQELTHDF YLIIVQAEQE LRHNRLTLQK 120
  121 LLYYLQPTMW VMHEVWSSLV IIQLSDSRDA EVLTYLHERI KRLEGNKDAQ QLIIGLVRKA 180
  181 AKPYMRMLQM WIQKGVIVDR HREFLVVD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [400-567]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NEVIHRDELP EHYSDDYWER RYTLRDEQIP SFLAKYSDKI LRTGKYLNVI RQCGKRVMPT  60
   61 QEMNLEFDPT SERHVSVIND AYYFAARMLL DVLLTENDLM GHLQSVKRYL LLNQGDFTMQ 120
  121 FMDACEDELT KNVDHVLPMT LENLLGLTLR ISSARNDPYK DDLHCELL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [568-819]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PYDLVTQMSK IMKKEENWQA QPRLDLSGLE CFAFTYEVKW PCSLVLNHIS ISKYQMLFRQ  60
   61 LFYCKHVERQ LCKIWKENSI ARQFEPQAAS LYRAAFTLRQ RMMNAIQNLE YYMMIEIIEP 120
  121 NWHIFIEKMK TVENVDNVLR LHQDFLDSCL KNCMLTESSH LNRSIFKLCK ICLKYCEFIQ 180
  181 IETPLDPTDT FSERVRRFDL EFTQLLISFL KQINSMAKKN TADCFMNLVH RINFNAFYTD 240
  241 QMDKMCVEDA IG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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