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View Structure Prediction Details

Protein: Grip84-PB
Organism: Drosophila melanogaster
Length: 852 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Grip84-PB.

Description E-value Query
Range
Subject
Range
Grip84-PA - The gene gamma-tubulin ring protein 84 is referred to in FlyBase by the symbol Dmel\Grip84 (CG3917, ...
680.0 [0..1] [852..75]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYALLVFVER YSECKPVSES SSSTSLSAMG LPHGNKTSDV NSAAGSVPTT LAIASTSTIL  60
   61 TTSQNVSGST RLSLTQSQDF PTSTPVNCKK ATESDTTPVV FVRRGPMDRN RGAGKDERND 120
  121 LSVIKERVLN AVSDQSLSGY RSVTNKTGNS PKSMPNDLVT LTDVPDEYRT HLLWEYYKVD 180
  181 GDKVPRAE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.24
Match: 2fj7I
Description: No description for 2fj7I was found.

Predicted Domain #2
Region A:
Residues: [189-399]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IAAMPLLSQE SMLLDELLHC LTGIRESLLV PQKPIISAVG LAKYDTDFDI HTHLDRSLTH  60
   61 QVREILPLAS YFMGVQKIIA ATDGLGQVMN SLNEALQELT HDFYLIIVQA EQELRHNRLT 120
  121 LQKLLYYLQP TMWVMHEVWS SLVIIQLSDS RDAEVLTYLH ERIKRLEGNK DAQQLIIGLV 180
  181 RKAAKPYMRM LQMWIQKGVI VDRHREFLVV D

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [400-578]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NEVIHRDELP EHYSDDYWER RYTLRDEQIP SFLAKYSDKI LRTGKYLNVI RQCGKRVMPT  60
   61 QEMNLEFDPT SERHVSVIND AYYFAARMLL DVLLTENDLM GHLQSVKRYL LLNQGDFTMQ 120
  121 FMDACEDELT KNVDHVLPMT LENLLGLTLR ISSARNDPYK DDLHCELLPY DLVTQMSKI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [579-695]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKEENWQAQ PRLDLSGLEC FAFTYEVKWP CSLVLNHISI SKYQMLFRQL FYCKHVERQL  60
   61 CKIWKENSIA RQFEPQAASL YRAAFTLRQR MMNAIQNLEY YMMIEIIEPN WHIFIEK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [696-852]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTVENVDNV LRLHQDFLDS CLKNCMLTES SHLNRSIFKL CKICLKYCEF IQITQRYFQD  60
   61 AELRSMVRDS ADSSESEQES LHCPQIETPL DPTDTFSERV RRFDLEFTQL LISFLKQINS 120
  121 MAKKNTADCF MNLVHRINFN AFYTDQMDKM CVEDAIG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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