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View Structure Prediction Details

Protein: Grip84-PB
Organism: Drosophila melanogaster
Length: 852 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Grip84-PB.

Description E-value Query
Range
Subject
Range
Grip84-PA - The gene gamma-tubulin ring protein 84 is referred to in FlyBase by the symbol Dmel\Grip84 (CG3917, ...
680.0 [0..1] [852..75]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYALLVFVER YSECKPVSES SSSTSLSAMG LPHGNKTSDV NSAAGSVPTT LAIASTSTIL  60
   61 TTSQNVSGST RLSLTQSQDF PTSTPVNCKK ATESDTTPVV FVRRGPMDRN RGAGKDERND 120
  121 LSVIKERVLN AVSDQSLSGY RSVTNKTGNS PKSMPNDLVT LTDVPDEYRT HLLWEYYKVD 180
  181 GDKVPRAE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.24
Match: 2fj7I
Description: No description for 2fj7I was found.

Predicted Domain #2
Region A:
Residues: [189-399]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IAAMPLLSQE SMLLDELLHC LTGIRESLLV PQKPIISAVG LAKYDTDFDI HTHLDRSLTH  60
   61 QVREILPLAS YFMGVQKIIA ATDGLGQVMN SLNEALQELT HDFYLIIVQA EQELRHNRLT 120
  121 LQKLLYYLQP TMWVMHEVWS SLVIIQLSDS RDAEVLTYLH ERIKRLEGNK DAQQLIIGLV 180
  181 RKAAKPYMRM LQMWIQKGVI VDRHREFLVV D

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [400-578]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NEVIHRDELP EHYSDDYWER RYTLRDEQIP SFLAKYSDKI LRTGKYLNVI RQCGKRVMPT  60
   61 QEMNLEFDPT SERHVSVIND AYYFAARMLL DVLLTENDLM GHLQSVKRYL LLNQGDFTMQ 120
  121 FMDACEDELT KNVDHVLPMT LENLLGLTLR ISSARNDPYK DDLHCELLPY DLVTQMSKI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [579-695]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKEENWQAQ PRLDLSGLEC FAFTYEVKWP CSLVLNHISI SKYQMLFRQL FYCKHVERQL  60
   61 CKIWKENSIA RQFEPQAASL YRAAFTLRQR MMNAIQNLEY YMMIEIIEPN WHIFIEK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [696-852]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTVENVDNV LRLHQDFLDS CLKNCMLTES SHLNRSIFKL CKICLKYCEF IQITQRYFQD  60
   61 AELRSMVRDS ADSSESEQES LHCPQIETPL DPTDTFSERV RRFDLEFTQL LISFLKQINS 120
  121 MAKKNTADCF MNLVHRINFN AFYTDQMDKM CVEDAIG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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