| Protein: | bnb-PD, bnb-PA, ... |
| Organism: | Drosophila melanogaster |
| Length: | 442 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bnb-PD, bnb-PA, ....
| Description | E-value | Query Range |
Subject Range |
|
|
233.0 | [0..4] | [440..749] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MKCQLLFVAT VCLASVWALP VPDEEVAIQP DSGAKAELLT KTVLPTAVEP APLKPEAEKP 60
61 AETKTIEAKA AVPEQPDVNA NPSPSTP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [88-300] |
1 11 21 31 41 51
| | | | | |
1 AAEPAKEINS VELKSSAPDV ETAPAIPEKK TLPEEAKPAQ ENAPVEAEKK QEKTARTEAE 60
61 PTVEAQPQAT KAIEQAPEAP AANAEVQKQV VDEVKPQEPK IDAKSAEEPA IPAVVAAEKE 120
121 TPVPEQPARQ ERINEIEQKD AKKDAAVAEE PAKAAEATPT AAPEAATKSD SNIQVIAPEK 180
181 KSIESSPAAA AASPAAQAAQ AKSGEAPKPV DQQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [301-442] |
1 11 21 31 41 51
| | | | | |
1 KSTETVAESA PVLKTNAPLA PAGATKVTEA VKEQEKEQPA ADTAAKALPE QKKTEETAAP 60
61 AGAPEPTAAV APAAVPEAKK IDEAPAAETV VKGEEAIAKP IAQSPSAEPK KSSEEKSDKS 120
121 ESKVDESSES KESEESSESK EN
|
| Detection Method: | |
| Confidence: | 1.12 |
| Match: | 1h1kI |
| Description: | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA |
Matching Structure (courtesy of the PDB): |
|
