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View Structure Prediction Details

Protein: FBpp0309369, Tsf1-PA
Organism: Drosophila melanogaster
Length: 641 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309369, Tsf1-PA.

Description E-value Query
Range
Subject
Range
gi|30909317 - gi|30909317|gb|AAP37129.1| transferrin [Marmota monax]
647.0 [0..10] [640..2]

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Predicted Domain #1
Region A:
Residues: [1-641]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSPHKTHTW LPLAVAALLL ILGPQSSLAE EPIYRLCVPQ IYLAECQQLL ADPSEAGIRM  60
   61 ECVAGRDRVD CLELIEQRKA DVLATEPEDM YIAYHRKNED YRVISEIRTQ QDKDAAFRYE 120
  121 GIILVKKDSP IRTLQQLRGA KSCHTGFGRN VGYKIPITKL KNTHVLKVSA DPQISATERE 180
  181 LKSLSEFFTQ SCLVGTYSTH PETDRLLKKK YANLCALCEK PEQCNYPDKF SGYDGAIRCL 240
  241 DKGQGEVAFS KVQYIKKYFG LPGAGPDAPP AEGNPENFEY LCEDGTRRPV TGPACSWAQR 300
  301 PWSGYISNEQ AVHNSEQLHQ LQSRLERFFA NGLQAQNKDA AAHLLIQPNA VYHSKDAAID 360
  361 PKVYLERAGY KDVIERDGSA IRKIRLCAQN DDEFAKCQAL HQAAYARDAR PELECVQSTD 420
  421 CVVALTKKEA DLTIVRATGY ADARSNQLQP IVYEQRAQDD VLVAVAAPGV TREALQKASI 480
  481 KFNENCERSR AAAALLNKRR GLDACRVSSS DDGEVQIVPA SELEKHKDAQ LVCPSLERRP 540
  541 VTDFRDCNVD VQLPRAIFIR SDTTSVEQET VKHLFSLISD KFGARGKLVD VFALFGEFQK 600
  601 GKKNVYFNDK AVQLTTELKN EIQNEQIYTD LQCNANKIAK Q

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 180.0
Match: 2havA
Description: No description for 2havA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle