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View Structure Prediction Details

Protein: por-PA, FBpp0302...
Organism: Drosophila melanogaster
Length: 525 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for por-PA, FBpp0302....

Description E-value Query
Range
Subject
Range
gi|1673627 - gi|1673627|gb|AAB18992.1| porcupine [Drosophila melanogaster]
287.0 [0..1] [525..1]

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Predicted Domain #1
Region A:
Residues: [1-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYQYFEEES DYIDLDEEEE DDDVVTAGSL DHRFGQPNGE EDYYFGGDDV EEELVVDGHG  60
   61 VLELAGRLLE SLQSCV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [77-286]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPSVLQVMQY VAPMLLLCLL CRLLCLLYSQ RRRLTSLAPL HLFHFACGLI ILQITVGYRL  60
   61 LLLLLLAAVG YLLLQLLRLG RRGAQVLAVL TVGSQFLYEL LIWRRRSDWP QLRGIQMVVN 120
  121 MKLISLGFDL TASGQLQARI PGPFAYLGYI YSPATCALGP WVSFGCYMDC LVPRNSWLVS 180
  181 LRRLLPNVVI CVLAVTVSNC VAPALSDFFG 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [287-525]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSSHFLVMYW DALSVRSSHY FVGMMAQALL VASDQRLDGA TKESDMLGPL ISQPWRIEWP  60
   61 RSISSLVRSW NIPMHEWLKR YIYAPCKPTA STSRGRILVV VLSTYLVSSL LHGMDLRIYL 120
  121 VLISLAFLAE GESLLRRQLA SLLNACITAN LCPGKERCRY SHCPSKRRLN SLSYWLARLT 180
  181 NLAFTALAIF HLAYLGVVLL GDDLEVGEDG DSFLWHWQQA GYLSHYIGLG TFVLYLFIS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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