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View Structure Prediction Details

Protein: por-PA, FBpp0302...
Organism: Drosophila melanogaster
Length: 525 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for por-PA, FBpp0302....

Description E-value Query
Range
Subject
Range
gi|1673627 - gi|1673627|gb|AAB18992.1| porcupine [Drosophila melanogaster]
287.0 [0..1] [525..1]

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Predicted Domain #1
Region A:
Residues: [1-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYQYFEEES DYIDLDEEEE DDDVVTAGSL DHRFGQPNGE EDYYFGGDDV EEELVVDGHG  60
   61 VLELAGRLLE SLQSCV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [77-286]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPSVLQVMQY VAPMLLLCLL CRLLCLLYSQ RRRLTSLAPL HLFHFACGLI ILQITVGYRL  60
   61 LLLLLLAAVG YLLLQLLRLG RRGAQVLAVL TVGSQFLYEL LIWRRRSDWP QLRGIQMVVN 120
  121 MKLISLGFDL TASGQLQARI PGPFAYLGYI YSPATCALGP WVSFGCYMDC LVPRNSWLVS 180
  181 LRRLLPNVVI CVLAVTVSNC VAPALSDFFG 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [287-525]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSSHFLVMYW DALSVRSSHY FVGMMAQALL VASDQRLDGA TKESDMLGPL ISQPWRIEWP  60
   61 RSISSLVRSW NIPMHEWLKR YIYAPCKPTA STSRGRILVV VLSTYLVSSL LHGMDLRIYL 120
  121 VLISLAFLAE GESLLRRQLA SLLNACITAN LCPGKERCRY SHCPSKRRLN SLSYWLARLT 180
  181 NLAFTALAIF HLAYLGVVLL GDDLEVGEDG DSFLWHWQQA GYLSHYIGLG TFVLYLFIS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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