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View Structure Prediction Details

Protein: gi|24642984, gi|...
Organism: Drosophila melanogaster
Length: 432 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24642984, gi|....

Description E-value Query
Range
Subject
Range
gi|125980646, gi... - gi|54642654|gb|EAL31399.1| GA19279-PA [Drosophila pseudoobscura], gi|125980646|ref|XP_001354346.1| G...
564.0 [0..13] [417..1]

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Predicted Domain #1
Region A:
Residues: [1-132]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANPLTHPPS LPLAASQQSQ SSRSSRSAHS SWSCHSRQVL LVIMILSVVM PFTKARHLRD  60
   61 QVALDYAYDE DNSGRSSSSS SSSSSSGGDI LPAFDVNPYR GLADSFGEGS YDSDMSLSES 120
  121 SYEEIAQAAI RA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [133-241]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ARREMRRQRT RHARSHNLRL FSGKSEIPEW ENPCGGTYTP DESLSDSSAS QGRVIKRKHL  60
   61 ENLRNITMSE YQDITHRATL EYGNLQHWQR EYKFLPNMTR PTSALRSIH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [242-432]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQSLTSTLL LNLQVKLKTW YRHMQTFVGS FSYLGRAQYK FRKDQQKSLN EAVTKELHDL  60
   61 LVSARYMLCE IELTINASYP NSNGAKLSRV SRQAMEERLN FHTPANGSME ADQRDLKVSK 120
  121 ELYFQYLNNV WKTLHRVLRR PRRNSAERRH LAAIHGTGAS GLRAGSSEML DVGSSNGSGG 180
  181 SSGSDGGSNE S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle