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View Structure Prediction Details

Protein: gi|24642984, gi|...
Organism: Drosophila melanogaster
Length: 432 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24642984, gi|....

Description E-value Query
Range
Subject
Range
gi|125980646, gi... - gi|54642654|gb|EAL31399.1| GA19279-PA [Drosophila pseudoobscura], gi|125980646|ref|XP_001354346.1| G...
564.0 [0..13] [417..1]

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Predicted Domain #1
Region A:
Residues: [1-132]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANPLTHPPS LPLAASQQSQ SSRSSRSAHS SWSCHSRQVL LVIMILSVVM PFTKARHLRD  60
   61 QVALDYAYDE DNSGRSSSSS SSSSSSGGDI LPAFDVNPYR GLADSFGEGS YDSDMSLSES 120
  121 SYEEIAQAAI RA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [133-241]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ARREMRRQRT RHARSHNLRL FSGKSEIPEW ENPCGGTYTP DESLSDSSAS QGRVIKRKHL  60
   61 ENLRNITMSE YQDITHRATL EYGNLQHWQR EYKFLPNMTR PTSALRSIH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [242-432]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQSLTSTLL LNLQVKLKTW YRHMQTFVGS FSYLGRAQYK FRKDQQKSLN EAVTKELHDL  60
   61 LVSARYMLCE IELTINASYP NSNGAKLSRV SRQAMEERLN FHTPANGSME ADQRDLKVSK 120
  121 ELYFQYLNNV WKTLHRVLRR PRRNSAERRH LAAIHGTGAS GLRAGSSEML DVGSSNGSGG 180
  181 SSGSDGGSNE S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle