| Protein: | gi|28571335, gi|... |
| Organism: | Drosophila melanogaster |
| Length: | 1740 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|28571335, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
1086.0 | [0..283] | [1740..1] |
|
Region A: Residues: [1-259] |
1 11 21 31 41 51
| | | | | |
1 MSLGQNWRLS GFDAPPSTRP KLSHNPSPTP QKLAVIANGD MTAMAKSYEH KLNSGSWEDT 60
61 LDEPHHHHAH HSHHQQHLHQ HHSHLSQRHQ QQQQQQQQLQ QTSFIGSPPS SASITTAQLH 120
121 SAFSRRIAEQ RERDQRDQRD QREAVGCTAA TIAGGSFSAN GGQAAVGVGV GSSSSCGSSS 180
181 ERDTKSPCRE RDRNLERDRD RERDKNDDLG EEEVLTEEEQ TSSSVSSLSA GNQRNSQLRS 240
241 TFNKAKQHLS FDKWRTAAT
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [260-342] |
1 11 21 31 41 51
| | | | | |
1 GSATGSASGP GSSATDSNNA ASNMIMRRAS ACTMPSSGGG GGAGVGSSQR EEATTPGESP 60
61 GGRLSRWFSI RRGSSHQYDV GGR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [343-894] |
1 11 21 31 41 51
| | | | | |
1 DGRHSTASSF DTPDSGSGNS PKNGSNAVAG TGGAGSQGVA LDAASPQKLA NLGASKMMPG 60
61 VPESEDDEAT ANRFDVDLMM TPGSRANGTA RTAHNRLIVP MLPPAPAGLS QQQLKRRHIV 120
121 AAIVHSENSY VATLQRLVND YKKPLEECSP PVLNPVKIAT LFHCLPDILH SHKLFRISLA 180
181 ECVRNWDRDE KIGDCFVSAF GKPQLLEIYS GFINNFSAAM ELAKMEEKRK SALADFFKVK 240
241 QISAHDRLSF FGLMVKPVQR FPQFILFLQD LLKYTPQGHH DRMSLQLALS QLELLAELLN 300
301 ESKREAEQYQ AFKEMLGHIS GTFNARSLSL SSVSVSDSAG GHRPRYLLRE DNVTHMEFNQ 360
361 AGFIVKCKQR RLLLLNDKVI CVSVAPKQSH DFGATEKLTF KWMFPVNDVE IVDNSTSATL 420
421 SRILTAGLNR GGSLKSNGSS GANGSPYANS TLPGHGGGVS GFSGFGDPHS SPAAQLTNGA 480
481 DNLCSEMSTL MYDYEVISRI QDLVSSLKGS YKELNANTTR NVLNLIQGSI QRKDEEMAWV 540
541 DSCCLQLIGR HK
|
| Detection Method: | |
| Confidence: | 64.69897 |
| Match: | 2pz1A |
| Description: | No description for 2pz1A was found. |
|
Region A: Residues: [895-981] |
1 11 21 31 41 51
| | | | | |
1 SGKEETFTFQ TQTPAVKKEW ITELRLAQLA LDPNNSPAWE RGGSHPQPAH HHPHHHPLQH 60
61 PHAGAGDPRQ TQEQLQLQEA VQQKQSR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [982-1317] |
1 11 21 31 41 51
| | | | | |
1 KMPLFVKAMP VYKSQHQTEV RCGCYYSIAN DTKQSGNARR RHKQLNYLWM CSSDGTSSHI 60
61 TVLAQHPQQA GNLREAGAFD LFETQVSALE FVKGLDQLKS RDEPASLLGD LVWLGTDSRK 120
121 ILIYSARNPE QEEQLGSYSV PGAVQRILYH FDAVYVALSG ATVLIFRRGN DGVWQLRDPQ 180
181 TIRLGDTDLV VPSLLPINMC IYASCGNRVY VMNALNGEIQ RSFEVQHGAT QQVNLMAHSG 240
241 IGLWISLKNS TMLCLYHTET FKHLQDINIA SSVLRHDGKK EQPLNNSSVY VTALMACKGL 300
301 LWVGTNVGIA VTIPLPRLEG VPIISGGINM SCHAHF
|
| Detection Method: | |
| Confidence: | 35.522879 |
| Match: | 2ovpB |
| Description: | No description for 2ovpB was found. |
|
Region A: Residues: [1318-1419] |
1 11 21 31 41 51
| | | | | |
1 GPITFLLPLI PKVYPAYKPP TVGAAPLVPS MGDDLQLPAI DADPKIQELD DGAVVLRRDL 60
61 AKEEMSSSNP GADSTASSPR SSKLDKQNSL DQSFTAKIRA SL
|
| Detection Method: | |
| Confidence: | 33.09691 |
| Match: | 1p22A |
| Description: | F-box/WD-repeat protein 1 (beta-TRCP1) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1420-1590] |
1 11 21 31 41 51
| | | | | |
1 ANSPAFHRKR FRDDPNRMSK TLPRGLGAAA AGSGAGGASA AGSGTASGNT SQHGEHGICD 60
61 VYGLYGKLIF VKEDYDAEEG NQGNLMDMMY EGMRRSDPEL AAIPGKVCTL DRRLRMKASR 120
121 PRSLDLSNWS VDSKSSSLYT SSGSEESMGI RHFGGRSVSR NSSSASHKTS G
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1591-1740] |
1 11 21 31 41 51
| | | | | |
1 TGSDLGNISE NGLMTTADIH HHQQQQQQLN SSAKPDEMSR LGAGNSGLDK PAAAVATLKR 60
61 KQKQNSKQQQ QQNADGPRTV ITLMGGRGYW RQMWYNGAGG SPSHKNSSSG GGGGSGSGFS 120
121 GQTMQSGNPS CSPLTANSND AHIVVWEKKL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
