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View Structure Prediction Details

Protein: CG9132-PB
Organism: Drosophila melanogaster
Length: 246 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9132-PB.

Description E-value Query
Range
Subject
Range
NECAP1 - NECAP endocytosis associated 1
387.0 [0..1] [246..5]
gi|114643284, gi... - gi|114643288|ref|XP_001166796.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes], gi|114...
384.0 [0..1] [246..5]
NECP1_PONAB - Adaptin ear-binding coat-associated protein 1 OS=Pongo abelii GN=NECAP1 PE=2 SV=1
NECP1_PONPY - Adaptin ear-binding coat-associated protein 1 - Pongo pygmaeus (Orangutan)
384.0 [0..1] [246..5]
gi|108997983 - gi|108997983|ref|XP_001087060.1| PREDICTED: NECAP endocytosis associated 2 isoform 2 [Macaca mulatta...
383.0 [0..3] [246..6]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYESVLIVK PEVFIYKIPP RASNRGYRAG DWNLKEPTWT GRMRLVAKGT AVVLKLEDKT  60
   61 SGALFANCPI DTYPGVAIEA VSDSSRYFVI RVQDDNGRSA FLGLGFGDRS DSFDLNVALQ 120
  121 DHFKWVKNQE QIEKEKTEPK QELDLGFK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.0
Match: 1tqzA
Description: Solution structure of NECAP1 protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.71359450116612 bayes_pls_golite062009
clathrin binding 2.40957758416782 bayes_pls_golite062009
protein binding 2.32907126599643 bayes_pls_golite062009
transporter activity 1.28986800087234 bayes_pls_golite062009
phospholipid binding 1.09683218092034 bayes_pls_golite062009
substrate-specific transporter activity 0.79883446648737 bayes_pls_golite062009
protein domain specific binding 0.75677415006638 bayes_pls_golite062009
phosphoinositide binding 0.71817045430443 bayes_pls_golite062009
cytoskeletal protein binding 0.268141992393579 bayes_pls_golite062009
lipid binding 0.179561240451969 bayes_pls_golite062009
pyrophosphatase activity 0.0611639610381174 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.0524559849408587 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.0498422520006935 bayes_pls_golite062009
actin binding 0.0485598963526399 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [149-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGETIKINMR ITKKDGSEGS SRTGKNKGSS GVLPPPPGGL GKIAPPPAAA AANTTVRQSP  60
   61 GVSPAHRPAA GGSEWTDYAS AGGNQGQQNS ANANWVQF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle