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View Structure Prediction Details

Protein: mRpL22-PA
Organism: Drosophila melanogaster
Length: 233 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mRpL22-PA.

Description E-value Query
Range
Subject
Range
gi|54643906, gi|... - gi|54643906|gb|EAL32649.1| GA18397-PA [Drosophila pseudoobscura], gi|125983650|ref|XP_001355590.1| G...
RM22_DROPS - 39S ribosomal protein L22, mitochondrial OS=Drosophila pseudoobscura pseudoobscura GN=mRpL22 PE=3 SV...
202.0 [0..8] [233..1]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKVIRQMSQ LRLQAPQGAA LLRSADSSSI SPAISPVSPP ALQSKSLHTA ASAGMLCAKW  60
   61 NKYNYGPRKW LEYNKTVHPP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [81-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QETDEEPRNA YVCHMRSNIK YSPDKMWYIA AFVRGMSVDE ALKQLNFVLK KGATDVKETI  60
   61 LEAQQIAVER HNVEYKSNLW IAESFVGKGR VFKGVRRHAR GRFGKVEYKH CHYFVRLEEG 120
  121 EPPQHYYQEP QTPEQQYESW MEQMRSRKII NSL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.221849
Match: 2ftcM
Description: No description for 2ftcM was found.

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