YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: mRpL22-PA
Organism: Drosophila melanogaster
Length: 233 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mRpL22-PA.

Description E-value Query
Range
Subject
Range
gi|54643906, gi|... - gi|54643906|gb|EAL32649.1| GA18397-PA [Drosophila pseudoobscura], gi|125983650|ref|XP_001355590.1| G...
RM22_DROPS - 39S ribosomal protein L22, mitochondrial OS=Drosophila pseudoobscura pseudoobscura GN=mRpL22 PE=3 SV...
202.0 [0..8] [233..1]

Back

Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKVIRQMSQ LRLQAPQGAA LLRSADSSSI SPAISPVSPP ALQSKSLHTA ASAGMLCAKW  60
   61 NKYNYGPRKW LEYNKTVHPP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [81-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QETDEEPRNA YVCHMRSNIK YSPDKMWYIA AFVRGMSVDE ALKQLNFVLK KGATDVKETI  60
   61 LEAQQIAVER HNVEYKSNLW IAESFVGKGR VFKGVRRHAR GRFGKVEYKH CHYFVRLEEG 120
  121 EPPQHYYQEP QTPEQQYESW MEQMRSRKII NSL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.221849
Match: 2ftcM
Description: No description for 2ftcM was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle