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View Structure Prediction Details

Protein: TH1-PA, FBpp0309276
Organism: Drosophila melanogaster
Length: 578 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TH1-PA, FBpp0309276.

Description E-value Query
Range
Subject
Range
gi|114682835 - gi|114682835|ref|XP_001139660.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
1016.0 [0..1] [578..19]

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Predicted Domain #1
Region A:
Residues: [1-166]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVEYDDSGW QGRAKGQTNP EETLEDNPQK TIQECLEKFL TPDYIMEPGI FTQLKRYFQS  60
   61 GGSPEEVISM LSENYKAVAQ MANLLAEWLI LAGVKVTEVQ AMVENHLKEM ILKSFDPKKA 120
  121 DTIFTEEGET PDWLTEMIDH YTWRSLIYRL AEEYPDCLML NFTIKL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [167-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ISDAGFQSEI TSISTAAQQI EVFSRVLKTS IVKFLNNPDD VHGAIQECAR MVCHGQHTYV  60
   61 YSQVLIQVLS QEQKGGFNMK RLSQEIIKYA LQNNQNVTPI TMALNGSAVY PQACQALTSM 120
  121 LTRNTLNPAD ITVLFRNYSG SDP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [310-359]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPIDLIRNPQ FLELLVDALF RSGVKINPEH KPKYMFLLAY ASAVIDQPAK 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [360-578]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRPMTERMLN KEELKSTIQA IEKAHTICNV DQGSTELIAE LQTLYNCIKY PVVGVGVIRW  60
   61 IENVVMEPSY FKLSTDSCPT HLAVLDEVAA VHPTLQQQIL FLLIRLFESK QDELEILVQL 120
  121 EMKKMILDRM VNLLTRGCVV PVLRYIKQCC AIEDTDISLI RYFVTEVLET ITHPYSPEFV 180
  181 QLFLPMVENE EITGTMRGEG DNDPVSEFIV HCKAHYTTV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle