| Protein: | Lcch3-PC |
| Organism: | Drosophila melanogaster |
| Length: | 496 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Lcch3-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
386.0 | [0..1] | [496..1] |
|
Region A: Residues: [1-416] |
1 11 21 31 41 51
| | | | | |
1 MTCFTRVGVS CGLFFFLLGA QLQLIRCIRK DVLAGRLENV TQTISNILQG YDIRLRPNFG 60
61 GEPLHVGMDL TIASFDAISE VNMDYTITMY LNQYWRDERL AFNIFGQYFD DENDDGISDV 120
121 LTLSGDFAEK IWVPDTFFAN DKNSFLHDVT ERNKLVRLGG DGAVTYGMRF TTTLACMMDL 180
181 HYYPLDSQNC TVEIESYGYT VSDVVMYWKP TPVRGVEDAE LPQFTIIGYE TNDRKERLAT 240
241 GVYQRLSLSF KLQRNIGYFV FQTYLPSILI VMLSWVSFWI NHEATSARVA LGITTVLTMT 300
301 TISTGVRSSL PRISYVKAID IYLVMCFVFV FAALLEYAAV NYTYWGKRAK KKIKKVKECC 360
361 PGKIGKSERS ETCSTTEDII ELQDVRMSPI PSLRRGTYNA TLDSIGTETM NLGKFP
|
| Detection Method: |  |
| Confidence: | 55.0 |
| Match: | 2bg9B |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [417-496] |
1 11 21 31 41 51
| | | | | |
1 PSFRITRNYG TGHSQLRRRA QRGISTRPRM LHALKRGASA IKATIPKIKD VNIIDKYSRM 60
61 IFPISFLAFN LGYWLFYILE
|
| Detection Method: | |
| Confidence: | 33.0 |
| Match: | 1oedB |
| Description: | Acetylcholine receptor protein, beta chain |
Matching Structure (courtesy of the PDB): |
|
