| Protein: | HDAC6-PB |
| Organism: | Drosophila melanogaster |
| Length: | 1135 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HDAC6-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
1003.0 | [0..8] | [1135..11] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MLRDIWIQSP PIVTRRSAQQ AKIQTRAMAS KSKTGTTGAA TAAGGTGSSS GSISGGFNAA 60
61 DPRKSNKPNA ALLEAKRRAR NNMLKNQGCG SQE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [94-476] |
1 11 21 31 41 51
| | | | | |
1 SVTDIFQNAV NSKSLVRKPT ALIYDESMSQ HCCLWDKEHY ECPERFTRVL ERCRELNLTE 60
61 RCLELPSRSA TKDEILRLHT EEHFERLKET SGIRDDERME ELSSRYDSIY IHPSTFELSL 120
121 LASGSTIELV DHLVAGKAQN GMAIIRPPGH HAMKAEYNGY CFFNNVALAT QHALDVHKLQ 180
181 RILIIDYDVH HGQGTQRFFY NDPRVVYFSI HRFEHGSFWP HLHESDYHAI GSGAGTGYNF 240
241 NVPLNATGMT NGDYLAIFQQ LLLPVALEFQ PELIIVSAGY DAALGCPEGE MEVTPACYPH 300
301 LLNPLLRLAD ARVAVVLEGG YCLDSLAEGA ALTLRSLLGD PCPPLVETVP LPRAELAQAL 360
361 LSCIAVHRPH WRCLQLQQTY DCV
|
| Detection Method: | |
| Confidence: | 107.0 |
| Match: | 2nvrA |
| Description: | No description for 2nvrA was found. |
|
Region A: Residues: [477-917] |
1 11 21 31 41 51
| | | | | |
1 ELQDRDKEED LHTVLRHWIG GPPPMDRYPT RDTAIPLPPE KLTSNAARLQ VLRAETKLSV 60
61 PSFKVCYAYD AQMLLHCNLN DTGHPEQPSR IQHIHKMHDD YGLLKQMKQL SPRAATTDEV 120
121 CLAHTRAHVN TVRRLLGREP KELHDAAGIY NSVYLHPRTF DCATLAAGLV LQAVDSVLRG 180
181 ESRSGICNVR PPGHHAEQDH PHGFCIFNNV AIAAQYAIRD FGLERVLIVD WDVHHGNGTQ 240
241 HIFESNPKVL YISLHRYEHG SFFPKGPDGN FDVVGKGAGR GFNVNIPWNK KGMGDLEYAL 300
301 AFQQLIMPIA YEFNPQLVLV SAGFDAAIGD PLGGCKVTAE GYGMLTHWLS ALASGRIIVC 360
361 LEGGYNVNSI SYAMTMCTKT LLGDPVPTPQ LGATALQKPP TVAFQSCVES LQQCLQVQRN 420
421 HWRSLEFVGR RLPRDPVVGE N
|
| Detection Method: | |
| Confidence: | 8.35 |
| Match: | 2nvrA |
| Description: | No description for 2nvrA was found. |
|
Region A: Residues: [918-987] |
1 11 21 31 41 51
| | | | | |
1 NNEDFLTASL RHLNISNDDA TAAAGGLAGD RPDCGDERPS GSKPKVKVKT LSDYLAENKE 60
61 ALEQSEMFAV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [988-1135] |
1 11 21 31 41 51
| | | | | |
1 YPLKTCPHLR LLRPEEAPRS LDSGAECSVC GSTGENWVCL SCRHVACGRY VNAHMEQHSV 60
61 EEQHPLAMST ADLSVWCYAC SAYVDHPRLY AYLNPLHEDK FQEPMAWTHG CAWREDGCYA 120
121 TGPDGRDEDD DDDNGAGSSI CLRLERNN
|
| Detection Method: | |
| Confidence: | 22.0 |
| Match: | 2g43A |
| Description: | No description for 2g43A was found. |
