| Protein: | rab3-GEF-PA |
| Organism: | Drosophila melanogaster |
| Length: | 2075 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rab3-GEF-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
2073.0 | [0..2] | [1773..1] |
|
Region A: Residues: [1-182] |
1 11 21 31 41 51
| | | | | |
1 MSDQQKASLC PRLVDYMAIV GAHTTPPMPK GLQGLKAPPV QVPDLLRRYP PSDHADFPLP 60
61 LDMVYFCQPE GCTSVGPRRT GSAIRDMTSF VFALTDKDSG KTRYGICVNF YRPIERPSSA 120
121 AGSAGAGNDR PGNGGPGGHG GGAGGGAGGG GRAPSDSDRE LTSRRDSDQQ RLHSHHSHHQ 180
181 PH
|
| Detection Method: |  |
| Confidence: | 50.958607 |
| Match: | PF03456.9 |
| Description: | No description for PF03456.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [183-263] |
1 11 21 31 41 51
| | | | | |
1 HPSASPAVPK LGLMAPSADS ESGGSHSPSP RASRKRTKLR NQSLTSLCII SHHPFFTTFR 60
61 ECLFILKKLI DACNESSSPK R
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [264-459] |
1 11 21 31 41 51
| | | | | |
1 VGASQKINRD NVWTVLTGHV SDATPSIVLH DVREIETWIL RLLSTPVPVP GSTRVEVEVL 60
61 SPTVHEPLLF ALPDHTRFSL VDFPLHLPLE LLGVETCLKV WTLIMQENKV LFQSRDYNAL 120
121 SMSVMAFVTM LYPLEYMFPV IPLLPTCLSC AEQLLLAPTP FVIGVPASFL VYKKNFRLPD 180
181 DIWVVDLDST KLTPPT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [460-526] |
1 11 21 31 41 51
| | | | | |
1 GGYEEIPPLP EPEGTILKNH LKQVSPKALS LNSLRLPLQT PPHSAQASQR NSMSAQGTIS 60
61 SRQPSPM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [527-636] |
1 11 21 31 41 51
| | | | | |
1 NSPALNPFVY GTDVDSVDVA TRVAMVRFFN AQNTLANFAE HTRTLRLYPR PVVAFQINSF 60
61 LRSRPRASQF LNQFARTQAV EFLAEWSLTP TNVAFLRVQT GVMDPMQVGD
|
| Detection Method: | |
| Confidence: | 26.142668 |
| Match: | PF03455.10 |
| Description: | No description for PF03455.10 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [637-742] |
1 11 21 31 41 51
| | | | | |
1 KPKWFAHALT PIRFSVWDDG SSLNGALRSL KQLECQPTDE SGSDSEGADS SSSSYSSLSD 60
61 FVSEMASSDL SPSLHDVFGS YNRPHVVPQT LSSNLDPALV YHPPSK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [743-945] |
1 11 21 31 41 51
| | | | | |
1 LQYPEGIADA VASKEEEDEE RADSPVSSSS SRSDLSSPSF NRDSEFDFQP KGGQTLGSTT 60
61 VGSGAAAPSF ELATPLAMRL EATIKMASIE QESDTVSTAT GKTIAAGSKL QRHPSDSESR 120
121 PEKKIPPPLT PPVKQPGVSN ILARTGSSGS SSSSPGRQSS QSSLFENFAS HAKELVRETT 180
181 RQSSQEGLLA HVDKHALDED LDD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [946-1040] |
1 11 21 31 41 51
| | | | | |
1 KMRHTFEKFT LHAKKAAGEA SKQALEVSKQ AAGVSKNTLE DLTYVGKSTL GDLTKTAKEA 60
61 ATKKGIIKIE EHSAGGAGPP PKSPGSQLAT HKQVQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1041-1258] |
1 11 21 31 41 51
| | | | | |
1 QSGGQGGGNN FFSAIGTDFN GLASSTSTMF SGMFGKKSQQ KQVPVQQKQP NVSAGKAKSG 60
61 INFDPFPGRK GLVERTPLIK HSGPRQTQEE LTRQQNQERS HSNAENQTFL KDVTNQVLAG 120
121 EGVGWLKLNR FKKLMEDESY RTLVLSKLNK TLDKKIAPDD HIDDVCVTKP VWKGMLKCIQ 180
181 AIAGGLDVTF ANFGLGGMAS VFQLMEVAHT HYWSKEIN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1259-1357] |
1 11 21 31 41 51
| | | | | |
1 EGSDMSSSLL SSHAASPMGS RENLRSPSSP NGSHSALGSE WASPQESRKS STQLAHGGPG 60
61 GSHSGAPINR RLSSADSQDG QSTTEMFKDM LSQKRSALK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1358-1426] |
1 11 21 31 41 51
| | | | | |
1 NMLTSFDSDA AGSTGALSVV SLGVRLPSSC RSTVSDTEYE NTTTSKDSKK SSGNLWSGKS 60
61 TLSAGFRYT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1427-1671] |
1 11 21 31 41 51
| | | | | |
1 GGHLINTSSS PSPDSPRVYL FEGLLGKDRL NLWNQMQFWE DAFLDAVSQE RDMIGMDQGP 60
61 IEMMERYKSL SESERKRLEH DEDRLLSTML YNLTAILVML NVAKDEIRRK IRRLLGKSHI 120
121 GLVYSQEVHN VVDQINNLNG NDIDLKPLGS RLLHRQSFTV HQGTDVNGPL RFMEVRDDGL 180
181 VLRSVDGTIV ERWWYERLVN MTYSPKTKLL CLWRRNGGQT QLHKYYTRKC KELYNCIKEA 240
241 MERGG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1672-2075] |
1 11 21 31 41 51
| | | | | |
1 TPTNVPELGG EFPVQDMNTG EGGLLQVCLE GVGLLFSNSK FFVRLDHIRK CFTQKGGIFV 60
61 LEEYNPKTRN LIQRKYQSSM SDQICYSVLC VFSYVAAGQD QKKNPVVITP QIQDIHAQQK 120
121 QKHQQQQQHQ QPQQQQQPHQ TTTQQNQPTA VASAVPTTTA PAGQVNPNRM TAKSQAGSIS 180
181 IRHTVPMQKP TITMSTVQPQ ARMPAQVATA SVPVTVPVPP TPAPPTSNPA KLPQLPPRVP 240
241 SQPSTESLAS ISSPPPKLRT PMSAPPGPPP AIPPRTGAIS RSGSVPAARS FVRQASANST 300
301 PPQYTPQPPP PFVIPKRHSG LARASTLSSS TSPSMSSSSA SNHPGHSQSQ QRASHGSVAA 360
361 VLQSMPEAEP GYGSGSGSIS GSSSGSGSAS GSIASASPQA HRKH
|
| Detection Method: | |
| Confidence: | 8.69897 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
