| Protein: | Ir11a-PA |
| Organism: | Drosophila melanogaster |
| Length: | 659 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ir11a-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
384.0 | [0..173] | [656..334] |
|
Region A: Residues: [1-252] |
1 11 21 31 41 51
| | | | | |
1 MSRRAESCRD IHNGHSVMRF AILWLFSGCL LPGIQVGIWV VVRAQPTGRD VLLSRLGNQQ 60
61 NELNTRRLAN ASSYLTRNYI ANRINTLVVR EICVECPYEL SERQRQLVDQ ILASLAPELS 120
121 VLLHKGTAEE TTWEYTLFVV NDHTAFTGQV FIFPDELLER EFFCIVVVSE IQSRQFVRQT 180
181 VGSIVKSNLQ MHFVNVVVVA QLEDGTVGTY SYKLFKANCT PGITVRQINH FDRITGKPQQ 240
241 SMPDLYPVRN GH
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [253-659] |
1 11 21 31 41 51
| | | | | |
1 LGDCPFNVGA AHMPPHLIYK RHKDPPPASN VSIPAEDLAG IDWDLLQLLA KALKFRIQLY 60
61 MPQEPSQIFG EGNVSGCFRQ LADGTVSIAI GGLSGSDKRR SLFSKSTVYH QSNFVMVVRR 120
121 DRYLGRLGPL ILPFRGKLWG VIIVILLLAV LSTCWLRSRL GLSHPIEDLL TVIVGNPIPD 180
181 HRLPGKGFLR YLLASWMLLT LVLRCAYQAR LFDVLRLSRH RPLPKDLSGL IKDNYTMVAN 240
241 GYHDFYPLEL TCRQPLDFSA RFERVQRAAP DERLTTIALI SNLAYWNHKH PNISRLTFVR 300
301 QPIYMYHLVI YFPRRFFLRP AIDRKIKQLL SAGVMAHIER RYMQYENKRK VASNDPVLLR 360
361 RITKSIMNGA YRIHGLVIVL ATGMFILELL AGRSNGRLRR WMEWVHQ
|
| Detection Method: | |
| Confidence: | 41.522879 |
| Match: | 1yaeA |
| Description: | Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid |
Matching Structure (courtesy of the PDB): |
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