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View Structure Prediction Details

Protein: Gr10a-PA
Organism: Drosophila melanogaster
Length: 408 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr10a-PA.

Description E-value Query
Range
Subject
Range
gi|54643188, gi|... - gi|54643188|gb|EAL31932.1| GA17050-PA [Drosophila pseudoobscura], gi|125981745|ref|XP_001354876.1| G...
383.0 [0..5] [408..422]

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Predicted Domain #1
Region A:
Residues: [1-173]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSPDERKSF WERHEFKFYR YGHVYALIYG QVVIDYVPQR ALKRGVKVLL IAYGHLFSML  60
   61 LIVVLPGYFC YHFRTLTDTL DRRLQLLFYV SFTNTAIKYA TVIVTYVANT VHFEAINQRC 120
  121 TMQRTHLEFE FKNAPQEPKR PFEFFMYFKF CLINLMMMIQ VCGIFAQYGE VGK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [174-408]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSVSQVRVHF AIYAFVLWNY TENMADYCYF INGSVLKYYR QFNLQLGSLR DEMDGLRPGG  60
   61 MLLHHCCELS DRLEELRRRC REIHDLQRES FRMHQFQLIG LMLSTLINNL TNFYTLFHML 120
  121 AKQSLEEVSY PVVVGSVYAT GFYIDTYIVA LINEHIKLEL EAVALTMRRF AEPREMDERL 180
  181 TREIEHLSLE LLNYQPPMLC GLLHLDRRLV YLIAVTAFSY FITLVQFDLY LRKKS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle