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View Structure Prediction Details

Protein: Gr10a-PA
Organism: Drosophila melanogaster
Length: 408 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr10a-PA.

Description E-value Query
Range
Subject
Range
gi|54643188, gi|... - gi|54643188|gb|EAL31932.1| GA17050-PA [Drosophila pseudoobscura], gi|125981745|ref|XP_001354876.1| G...
383.0 [0..5] [408..422]

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Predicted Domain #1
Region A:
Residues: [1-173]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSPDERKSF WERHEFKFYR YGHVYALIYG QVVIDYVPQR ALKRGVKVLL IAYGHLFSML  60
   61 LIVVLPGYFC YHFRTLTDTL DRRLQLLFYV SFTNTAIKYA TVIVTYVANT VHFEAINQRC 120
  121 TMQRTHLEFE FKNAPQEPKR PFEFFMYFKF CLINLMMMIQ VCGIFAQYGE VGK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [174-408]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSVSQVRVHF AIYAFVLWNY TENMADYCYF INGSVLKYYR QFNLQLGSLR DEMDGLRPGG  60
   61 MLLHHCCELS DRLEELRRRC REIHDLQRES FRMHQFQLIG LMLSTLINNL TNFYTLFHML 120
  121 AKQSLEEVSY PVVVGSVYAT GFYIDTYIVA LINEHIKLEL EAVALTMRRF AEPREMDERL 180
  181 TREIEHLSLE LLNYQPPMLC GLLHLDRRLV YLIAVTAFSY FITLVQFDLY LRKKS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle