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View Structure Prediction Details

Protein: Dlic-PB
Organism: Drosophila melanogaster
Length: 398 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dlic-PB.

Description E-value Query
Range
Subject
Range
DC1L2_MOUSE - Cytoplasmic dynein 1 light intermediate chain 2 OS=Mus musculus GN=Dync1li2 PE=1 SV=2
530.0 [0..2] [397..102]

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Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRLGVWVLD GDPGHTNLLH YALNETNYAH TLVILTVSMT QPWGWLEQLN HWIKVLGQHI  60
   61 DSLQLDAKEK EAARQRLTTT WQSYCEVGDD LDPGSPVKRT MRNNSIDEDD LLPLTEDALI 120
  121 TNLGLDIVVV VTKTDYMTTL EKEYEYRDEH FDFIQQWIRN FCLRHGTSLF YTSVKEDKNC 180
  181 DVLYKYLTHR IYGLPFRTPA LVVEKDAVLI PAGWD

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.03
Match: 2p5sA
Description: No description for 2p5sA was found.

Predicted Domain #2
Region A:
Residues: [216-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLKKISILYE NMHGVKAENP YTDIIKSPPT RKAVSNREAE VQTEDEQAFL ARQQEILKQG  60
   61 DQV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [279-398]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RGESPLRSQG VGSNKSGPRT PGTTGQSSPK KIDPKLTPAT PGAEGVLANF FNSLLHKKSG  60
   61 SPGTGGPGGA GNPAGPGRTA NGTDAVMTPE KLAVRTDAAA ELDRLSRSVK KEIDMSQSEC 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.0
Match: 1y0fB
Description: No description for 1y0fB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle