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View Structure Prediction Details

Protein: CG15313-PA
Organism: Drosophila melanogaster
Length: 186 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG15313-PA.

Description E-value Query
Range
Subject
Range
gi|56474889 - gi|56474889|gb|AAV91784.1| chitinase [Spodoptera exigua]
150.0 [0..31] [185..397]
gi|9971609 - gi|9971609|dbj|BAB12678.1| endchitinase [Spodoptera litura]
148.0 [0..31] [185..397]
gi|42521347 - gi|42521347|gb|AAS18266.1| chitinase [Spodoptera frugiperda]
146.0 [0..31] [185..397]
gi|57340940 - gi|57340940|gb|AAW50396.1| chitinase [Ostrinia furnacalis]
145.0 [0..31] [180..397]
gi|21913148 - gi|21913148|gb|AAM43792.1| chitinase [Choristoneura fumiferana]
136.0 [0..31] [184..397]
gi|1841853 - gi|1841853|gb|AAB47539.1| chitinase protein [Hyphantria cunea]
134.0 [0..31] [180..397]
gi|40788058 - gi|40788058|emb|CAF05663.1| chitinase [Lacanobia oleracea]
134.0 [0..31] [180..397]

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Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHHYQLLARE SVSRQLIPRP RRPQSTTSTP PTTTTSGSTL RSTTSAGHSA PPLSRRQQSR  60
   61 RRPHKYIEVY SRPPAKTAVI SATSSSQFLD EGFPVVHSQV AQRRRSGSIL P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [112-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKNDPKVIVH GHGIIECRAQ GNFPHPLNCR KFISCARFEE TGGIVGWEYT CPKGLTYDGV  60
   61 GGMCTWSPSD QPCRD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.154902
Match: 1wawA
Description: Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle