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View Structure Prediction Details

Protein: CG15313-PA
Organism: Drosophila melanogaster
Length: 186 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG15313-PA.

Description E-value Query
Range
Subject
Range
gi|56474889 - gi|56474889|gb|AAV91784.1| chitinase [Spodoptera exigua]
150.0 [0..31] [185..397]
gi|9971609 - gi|9971609|dbj|BAB12678.1| endchitinase [Spodoptera litura]
148.0 [0..31] [185..397]
gi|42521347 - gi|42521347|gb|AAS18266.1| chitinase [Spodoptera frugiperda]
146.0 [0..31] [185..397]
gi|57340940 - gi|57340940|gb|AAW50396.1| chitinase [Ostrinia furnacalis]
145.0 [0..31] [180..397]
gi|21913148 - gi|21913148|gb|AAM43792.1| chitinase [Choristoneura fumiferana]
136.0 [0..31] [184..397]
gi|1841853 - gi|1841853|gb|AAB47539.1| chitinase protein [Hyphantria cunea]
134.0 [0..31] [180..397]
gi|40788058 - gi|40788058|emb|CAF05663.1| chitinase [Lacanobia oleracea]
134.0 [0..31] [180..397]

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Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHHYQLLARE SVSRQLIPRP RRPQSTTSTP PTTTTSGSTL RSTTSAGHSA PPLSRRQQSR  60
   61 RRPHKYIEVY SRPPAKTAVI SATSSSQFLD EGFPVVHSQV AQRRRSGSIL P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [112-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKNDPKVIVH GHGIIECRAQ GNFPHPLNCR KFISCARFEE TGGIVGWEYT CPKGLTYDGV  60
   61 GGMCTWSPSD QPCRD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.154902
Match: 1wawA
Description: Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle