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View Structure Prediction Details

Protein: gi|24640930, gi|...
Organism: Drosophila melanogaster
Length: 1119 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24640930, gi|....

Description E-value Query
Range
Subject
Range
CG2990-PB - This gene is referred to in FlyBase by the symbol Dmel\CG2990 (CG2990, FBgn0030170). It is a protein...
813.0 [0..1] [1119..1]

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Predicted Domain #1
Region A:
Residues: [1-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATKRVLTPN ILENDNTDVT SSNPQKKFKE QLDFSSDEVE NIDWGDNDDF DLALIAAMDS  60
   61 ISNHRLELTK WQRCEVVRLE QLPNRKGLKV HVKRISGGDP ETADCQLLPP WNCMPMQVGD 120
  121 TVSLLGKWDP SAGCYVVDKE QGYCVSHPDF LISGTTVTGS LFCKRKSVLQ ERFRGLDSGN 180
  181 SVVSTSRYQH NPIYPE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [197-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CIPFQMVIGT LVHELLQKVL RQKLFDKKHI QSALQEMLAS SSLAHLLYAS NLIQVEMEDH  60
   61 LMKFIDPIVS FVAQYVKGEP PSVLLPEVYR GQIHEICDIE ENLWVPQL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [305-456]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLKGKVDVSV KVKNQRQREE IIPLELKTGR ASFSMEHKGQ LLLYQLMHSA QGRDTQSGLL  60
   61 LYLKEGLLRE VASGRNEQRD LLMLRNDLAY WLTREVAIPA SKEDPLEQLP LPEPVYHHSA 120
  121 CGNCAYNTIC SSFAQKDSSL QLSDSHPLKK LM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [457-1119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PQLLEHLSEA DHAYVQHWCG LLALEEQHNR QSSHVRSFWT KDPAEREKEG IAIRHLKLVK  60
   61 GQEVILEEGR YRQTLELGEE ADPSRDLSLS GFDLGEYVVI SSTSRLAVAA GFIVSIEARR 120
  121 LDLRLERDLS QRYSEETFII DKHDSQSFAT FNFTNLGMLL SEGERFQELR DIIVAKKPPE 180
  181 QHKVLPKIIL TKGAPILLNL NKVQQNAALR ALTTSSHLLI KGLPGTGKTQ TLVALVRLLH 240
  241 LLGKSVLITA QTHSAVDNLI MRLLPFGLPM MRLGSGSRIH KQLEEISEER LTKDCKTVEE 300
  301 LEKALGQPSI VGVTCLGCGH PLFQRRQFDY CIVDEATQVL QPTVLRPLIH CSKFVLVGDP 360
  361 EQLPPIVRSK EARQRGADET LFQRLDSEKA TAVLSLQYRM NKTITRLANE LTYGGDLKCA 420
  421 SDEVSGARFE VELLNEAPRW VQRALTTHLE QAVTLINTGD CLERCQEFVY ASQRLVDTCS 480
  481 SIEQSFSEDK DEIRKLTSKK RVSKYTNYCE AGIVMHLLRY LLKSGYEASR IGVIAPYRAQ 540
  541 VELFKKLASK LDTDLECNTV DQFQGRDKNL IIYSCSKTGG DFSDMERSRE AEILEDQRRL 600
  601 TVAITRAKNK LILLGDIKCL EQYGPFRQLF KHIPDRCRLK LEEGRMEFGW QRIQEDLVGL 660
  661 MDT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.0
Match: 2gjkA
Description: No description for 2gjkA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle