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View Structure Prediction Details

Protein: l(1)G0232-PE, FB...
Organism: Drosophila melanogaster
Length: 498 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for l(1)G0232-PE, FB....

Description E-value Query
Range
Subject
Range
l(1)G0232-PC - The gene lethal (1) G0232 is referred to in FlyBase by the symbol Dmel\l(1)G0232 (CG32697, FBgn00283...
435.0 [0..1] [498..300]

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Predicted Domain #1
Region A:
Residues: [1-164]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNREDELLA NIVGVGGGSG SGSAAGSAAI VSTNGTETEA ATTAATIISA VHQLGDNNTT  60
   61 VVTVSNGVGP AGSASGGATT AASAATEPNE NITINGLSPS HRQAANNSSS SSSSAATVAN 120
  121 PLKLNTSGSA DNNSTITNAT TAAGAAGAAA GTTTNGGGEF WSEN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [165-498]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPSSASSGFS DDDSLAGQEG DPKPIDQIVQ MVKQRGRHGL IKEYADIRNR APEGTFLHAR  60
   61 MRANLTKNRY TDVLCYDHSR VVLAHEDGDE PSDYINANFV DGYKQKNAYI STQGPLPKTS 120
  121 QDFWRMIWEQ HCLVIVMTTR VMERGRVKCG QYWEPTEESS LEFGDYHVRT ISVECNEDYM 180
  181 VASLELRNIK TDEIRNVSHW QFTSWPDYGV PSSAMAMLNF LQKVREKQAQ LVQGLGDTWA 240
  241 GHPRGPPIVV HCSAGIGRTG TFITLDICIS RLEDVGTADI RGTVEKIRSQ RAYSIQMPDQ 300
  301 YVFCHLALIE YAYSRGMLQT VDLAGFDERE PDSE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 93.09691
Match: 2pa5A
Description: No description for 2pa5A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle